scAtria single-cell spatial atlas resource

DKD_42056516 · CosMx SMI / NanoString SMI

DKD_42056516 · DKD_42056516__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-48 of 48
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

2 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
DKD_42056516__CosMx_SMI__1061 Kidney 26,581 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1062 Kidney 10,277 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1063 Kidney 11,034 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1064 Kidney 26,963 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1068 Kidney 3,245 Ready T1T2T3 View
Manifest Domain summary
DKD_42056516__CosMx_SMI__1070 Kidney 1,328 Ready T1T2T3 View
Manifest Domain summary
DKD_42056516__CosMx_SMI__1071 Kidney 16,397 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1072 Kidney 10,730 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2695 Kidney 29,896 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2753 Kidney 106,302 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2841 Kidney 100,792 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2844 Kidney 186,643 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2844_2 Kidney 76,272 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2873 Kidney 55,271 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2874 Kidney 52,399 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2924 Kidney 55,733 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2989 Kidney 72,643 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2990 Kidney 123,214 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3035 Kidney 69,024 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3035_2 Kidney 80,403 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3039 Kidney 196,590 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3063 Kidney 108,618 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3066 Kidney 41,472 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3068 Kidney 106,441 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3069 Kidney 46,525 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3070 Kidney 95,751 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3106 Kidney 85,987 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3421 Kidney 69,846 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3469 Kidney 78,631 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3474 Kidney 66,865 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3531 Kidney 60,305 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3531_2 Kidney 81,470 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3535 Kidney 22,480 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3542 Kidney 75,921 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3565 Kidney 179,861 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3588 Kidney 60,390 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3591 Kidney 50,742 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3594 Kidney 99,027 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3606 Kidney 39,636 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3612 Kidney 107,609 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3614 Kidney 60,250 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3616 Kidney 17,429 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3623 Kidney 14,214 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3624 Kidney 68,420 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3626 Kidney 54,046 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3631 Kidney 68,106 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3647 Kidney 85,374 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__Pediatric1 Kidney 229,669 NA T1T2T3 View NA
Interaction Propensity

Cell-type contact samples

2 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
DKD_42056516__CosMx_SMI__1061 Kidney 26,581 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1062 Kidney 10,277 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1063 Kidney 11,034 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1064 Kidney 26,963 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1068 Kidney 3,245 Ready T1T2T3 View
Manifest Pair summary
DKD_42056516__CosMx_SMI__1070 Kidney 1,328 Ready T1T2T3 View
Manifest Pair summary
DKD_42056516__CosMx_SMI__1071 Kidney 16,397 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1072 Kidney 10,730 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2695 Kidney 29,896 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2753 Kidney 106,302 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2841 Kidney 100,792 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2844 Kidney 186,643 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2844_2 Kidney 76,272 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2873 Kidney 55,271 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2874 Kidney 52,399 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2924 Kidney 55,733 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2989 Kidney 72,643 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2990 Kidney 123,214 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3035 Kidney 69,024 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3035_2 Kidney 80,403 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3039 Kidney 196,590 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3063 Kidney 108,618 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3066 Kidney 41,472 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3068 Kidney 106,441 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3069 Kidney 46,525 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3070 Kidney 95,751 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3106 Kidney 85,987 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3421 Kidney 69,846 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3469 Kidney 78,631 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3474 Kidney 66,865 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3531 Kidney 60,305 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3531_2 Kidney 81,470 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3535 Kidney 22,480 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3542 Kidney 75,921 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3565 Kidney 179,861 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3588 Kidney 60,390 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3591 Kidney 50,742 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3594 Kidney 99,027 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3606 Kidney 39,636 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3612 Kidney 107,609 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3614 Kidney 60,250 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3616 Kidney 17,429 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3623 Kidney 14,214 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3624 Kidney 68,420 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3626 Kidney 54,046 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3631 Kidney 68,106 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3647 Kidney 85,374 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__Pediatric1 Kidney 229,669 NA T1T2T3 View NA
Network Topology

Graph-topology samples

2 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
DKD_42056516__CosMx_SMI__1061 Kidney 26,581 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1062 Kidney 10,277 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1063 Kidney 11,034 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1064 Kidney 26,963 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1068 Kidney 3,245 Ready T1T2T3 View
Manifest Topology summary
DKD_42056516__CosMx_SMI__1070 Kidney 1,328 Ready T1T2T3 View
Manifest Topology summary
DKD_42056516__CosMx_SMI__1071 Kidney 16,397 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__1072 Kidney 10,730 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2695 Kidney 29,896 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2753 Kidney 106,302 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2841 Kidney 100,792 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2844 Kidney 186,643 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2844_2 Kidney 76,272 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2873 Kidney 55,271 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2874 Kidney 52,399 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2924 Kidney 55,733 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2989 Kidney 72,643 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK2990 Kidney 123,214 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3035 Kidney 69,024 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3035_2 Kidney 80,403 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3039 Kidney 196,590 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3063 Kidney 108,618 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3066 Kidney 41,472 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3068 Kidney 106,441 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3069 Kidney 46,525 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3070 Kidney 95,751 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3106 Kidney 85,987 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3421 Kidney 69,846 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3469 Kidney 78,631 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3474 Kidney 66,865 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3531 Kidney 60,305 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3531_2 Kidney 81,470 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3535 Kidney 22,480 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3542 Kidney 75,921 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3565 Kidney 179,861 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3588 Kidney 60,390 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3591 Kidney 50,742 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3594 Kidney 99,027 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3606 Kidney 39,636 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3612 Kidney 107,609 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3614 Kidney 60,250 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3616 Kidney 17,429 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3623 Kidney 14,214 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3624 Kidney 68,420 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3626 Kidney 54,046 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3631 Kidney 68,106 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__HK3647 Kidney 85,374 NA T1T2T3 View NA
DKD_42056516__CosMx_SMI__Pediatric1 Kidney 229,669 NA T1T2T3 View NA