Features
Cell-ontology markers
Features tested
17
Label tier
cell_type_tier_3
Marker output
10 rows
QC
Limited panel
Seurat FindAllMarkers, one curated cell-ontology label versus all others. Effect size is logFC; significance is BH FDR.
| Cell ontology | Feature | logFC | FDR | p value |
|---|---|---|---|---|
| T cell | cd45ro | 2.437 | 0.00e+0 | 0.00e+0 |
| T cell | gzmb | 1.639 | 0.00e+0 | 0.00e+0 |
| T cell | lag3 | 0.899 | 0.00e+0 | 0.00e+0 |
| T cell | hla1 | 0.300 | 0.00e+0 | 0.00e+0 |
| Granulocyte | tox | 1.771 | 0.00e+0 | 0.00e+0 |
| Granulocyte | lag3 | 1.406 | 0.00e+0 | 0.00e+0 |
| Tumor/Malignant cell | cd45ra | 1.525 | 0.00e+0 | 0.00e+0 |
| Tumor/Malignant cell | ki67 | 0.887 | 0.00e+0 | 0.00e+0 |
| Dendritic cell | hla1 | 0.363 | 0.00e+0 | 0.00e+0 |
| Endothelial cell | lag3 | 0.315 | 3.74e-163 | 3.74e-163 |