scAtria single-cell spatial atlas resource

HCC_39455893 · IMC / Imaging Mass Cytometry

HCC_39455893 · HCC_39455893__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-38 of 38
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

37 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HCC_39455893__IMC__TLS_J17136_P02_1_1 Liver 1,846 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P02_2_1 Liver 1,545 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P03_1_1 Liver 4,007 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P03_2_1 Liver 1,112 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P03_3_1 Liver 2,200 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P03_4_1 Liver 1,651 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P07_1_1 Liver 2,277 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P08A_1_1 Liver 2,837 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P08B_1_1 Liver 1,139 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P08B_2_1 Liver 636 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_1_1 Liver 1,611 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_1_2 Liver 653 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_2_1 Liver 1,226 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_3_1 Liver 1,010 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_3_2 Liver 982 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_4_1 Liver 527 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P09_4_2 Liver 1,026 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P12_1_1 Liver 1,375 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P12_2_1 Liver 573 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P12_2_2 Liver 1,365 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_J17136_P12_3_1 Liver 704 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT1_1_1 Liver 1,416 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT1_2_1 Liver 1,067 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT1_3_1 Liver 2,223 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT1_4_1 Liver 1,277 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT6A_1_1 Liver 1,834 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT6A_2_1 Liver 5,869 NA T1T2T3 View NA
HCC_39455893__IMC__TLS_OT6A_3_1 Liver 1,889 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT6A_4_1 Liver 1,852 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT6A_5_1 Liver 604 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT6A_5_2 Liver 1,298 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_1_1 Liver 1,560 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_2_1 Liver 3,007 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_3_1 Liver 2,553 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_3_2 Liver 1,042 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_4_1 Liver 1,174 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_4_2 Liver 976 Ready T1T2T3 View
Manifest Domain summary
HCC_39455893__IMC__TLS_OT7_5_1 Liver 1,450 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

37 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HCC_39455893__IMC__TLS_J17136_P02_1_1 Liver 1,846 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P02_2_1 Liver 1,545 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P03_1_1 Liver 4,007 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P03_2_1 Liver 1,112 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P03_3_1 Liver 2,200 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P03_4_1 Liver 1,651 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P07_1_1 Liver 2,277 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P08A_1_1 Liver 2,837 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P08B_1_1 Liver 1,139 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P08B_2_1 Liver 636 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_1_1 Liver 1,611 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_1_2 Liver 653 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_2_1 Liver 1,226 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_3_1 Liver 1,010 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_3_2 Liver 982 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_4_1 Liver 527 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P09_4_2 Liver 1,026 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P12_1_1 Liver 1,375 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P12_2_1 Liver 573 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P12_2_2 Liver 1,365 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_J17136_P12_3_1 Liver 704 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT1_1_1 Liver 1,416 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT1_2_1 Liver 1,067 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT1_3_1 Liver 2,223 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT1_4_1 Liver 1,277 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT6A_1_1 Liver 1,834 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT6A_2_1 Liver 5,869 NA T1T2T3 View NA
HCC_39455893__IMC__TLS_OT6A_3_1 Liver 1,889 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT6A_4_1 Liver 1,852 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT6A_5_1 Liver 604 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT6A_5_2 Liver 1,298 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_1_1 Liver 1,560 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_2_1 Liver 3,007 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_3_1 Liver 2,553 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_3_2 Liver 1,042 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_4_1 Liver 1,174 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_4_2 Liver 976 Ready T1T2T3 View
Manifest Pair summary
HCC_39455893__IMC__TLS_OT7_5_1 Liver 1,450 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

37 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HCC_39455893__IMC__TLS_J17136_P02_1_1 Liver 1,846 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P02_2_1 Liver 1,545 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P03_1_1 Liver 4,007 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P03_2_1 Liver 1,112 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P03_3_1 Liver 2,200 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P03_4_1 Liver 1,651 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P07_1_1 Liver 2,277 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P08A_1_1 Liver 2,837 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P08B_1_1 Liver 1,139 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P08B_2_1 Liver 636 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_1_1 Liver 1,611 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_1_2 Liver 653 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_2_1 Liver 1,226 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_3_1 Liver 1,010 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_3_2 Liver 982 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_4_1 Liver 527 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P09_4_2 Liver 1,026 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P12_1_1 Liver 1,375 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P12_2_1 Liver 573 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P12_2_2 Liver 1,365 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_J17136_P12_3_1 Liver 704 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT1_1_1 Liver 1,416 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT1_2_1 Liver 1,067 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT1_3_1 Liver 2,223 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT1_4_1 Liver 1,277 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT6A_1_1 Liver 1,834 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT6A_2_1 Liver 5,869 NA T1T2T3 View NA
HCC_39455893__IMC__TLS_OT6A_3_1 Liver 1,889 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT6A_4_1 Liver 1,852 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT6A_5_1 Liver 604 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT6A_5_2 Liver 1,298 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_1_1 Liver 1,560 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_2_1 Liver 3,007 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_3_1 Liver 2,553 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_3_2 Liver 1,042 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_4_1 Liver 1,174 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_4_2 Liver 976 Ready T1T2T3 View
Manifest Topology summary
HCC_39455893__IMC__TLS_OT7_5_1 Liver 1,450 Ready T1T2T3 View
Manifest Topology summary