scAtria single-cell spatial atlas resource

HCC_39965889 · PCF / CODEX / PhenoCycler Fusion

HCC_39965889 · HCC_39965889__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-31 of 31
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

10 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HCC_39965889__PCF_CODEX__A1_Pt18_Pre_Tumor_Core_Analysis Liver 5,280 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__A2_Post2_Tumor_Core Liver 22,221 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A2_Pre_Tumor_Core_Analysis Liver 17,854 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A2_post_Analysis Liver 24,056 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A6_pre_Analysis Liver 38,657 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A7_Post_Non_Tumor_Analysis Liver 9,070 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A7_Post_Tumor_Core_Analysis Liver 7,975 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A8_Pre_Tumor_Core_Analysis Liver 16,601 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B11_Post_Analysis Liver 5,374 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B11_pre_Reg1_Non_Tumor_Analysis Liver 5,372 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B11_pre_Reg1_Tumor_Core_Analysis Liver 718 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B11_pre_Reg2_Non_Tumor_Analysis Liver 625 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B11_pre_Reg2_Tumor_Core_Analysis Liver 7,091 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B14_post_Reg1_Tumor_Core_Analysis Liver 1,183 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B14_post_Reg2_Tumor_Core_Analysis Liver 5,968 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B18_post_reg1_Analysis Liver 5,342 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B18_post_reg2_Analysis Liver 3,810 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B19_Post_Tumor_Core Liver 16,504 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B20_Post_Reg1_Non-Tumor_Analysis Liver 4,693 Ready T1T2T3 View
Manifest Domain summary
HCC_39965889__PCF_CODEX__B20_Post_Reg1_Tumor_Core_Analysis Liver 10,476 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B20_Post_Reg2_Tumor_Core_Analysis Liver 16,837 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B2_Post2_Tumor_Core_Analysis Liver 6,339 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B2_Post_Tumor_Core_Analysis Liver 25,159 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B3_Post2_Analysis Liver 33,773 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B4_pre_Tumor_Core_Analysis Liver 15,449 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg1_Non_Tumor_Analysis Liver 7,327 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg1_Tumor_Core_Analysis Liver 7,917 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg2_Tumor_Core_Analysis Liver 20,734 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_Pre_Non_Tumor_Analysis Liver 28,534 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_Pre_Tumor_Core_Analysis Liver 11,303 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_post_Tumor_Core_Analysis Liver 4,913 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

10 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HCC_39965889__PCF_CODEX__A1_Pt18_Pre_Tumor_Core_Analysis Liver 5,280 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__A2_Post2_Tumor_Core Liver 22,221 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A2_Pre_Tumor_Core_Analysis Liver 17,854 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A2_post_Analysis Liver 24,056 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A6_pre_Analysis Liver 38,657 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A7_Post_Non_Tumor_Analysis Liver 9,070 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A7_Post_Tumor_Core_Analysis Liver 7,975 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A8_Pre_Tumor_Core_Analysis Liver 16,601 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B11_Post_Analysis Liver 5,374 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B11_pre_Reg1_Non_Tumor_Analysis Liver 5,372 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B11_pre_Reg1_Tumor_Core_Analysis Liver 718 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B11_pre_Reg2_Non_Tumor_Analysis Liver 625 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B11_pre_Reg2_Tumor_Core_Analysis Liver 7,091 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B14_post_Reg1_Tumor_Core_Analysis Liver 1,183 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B14_post_Reg2_Tumor_Core_Analysis Liver 5,968 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B18_post_reg1_Analysis Liver 5,342 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B18_post_reg2_Analysis Liver 3,810 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B19_Post_Tumor_Core Liver 16,504 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B20_Post_Reg1_Non-Tumor_Analysis Liver 4,693 Ready T1T2T3 View
Manifest Pair summary
HCC_39965889__PCF_CODEX__B20_Post_Reg1_Tumor_Core_Analysis Liver 10,476 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B20_Post_Reg2_Tumor_Core_Analysis Liver 16,837 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B2_Post2_Tumor_Core_Analysis Liver 6,339 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B2_Post_Tumor_Core_Analysis Liver 25,159 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B3_Post2_Analysis Liver 33,773 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B4_pre_Tumor_Core_Analysis Liver 15,449 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg1_Non_Tumor_Analysis Liver 7,327 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg1_Tumor_Core_Analysis Liver 7,917 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg2_Tumor_Core_Analysis Liver 20,734 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_Pre_Non_Tumor_Analysis Liver 28,534 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_Pre_Tumor_Core_Analysis Liver 11,303 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_post_Tumor_Core_Analysis Liver 4,913 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

10 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HCC_39965889__PCF_CODEX__A1_Pt18_Pre_Tumor_Core_Analysis Liver 5,280 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__A2_Post2_Tumor_Core Liver 22,221 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A2_Pre_Tumor_Core_Analysis Liver 17,854 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A2_post_Analysis Liver 24,056 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A6_pre_Analysis Liver 38,657 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A7_Post_Non_Tumor_Analysis Liver 9,070 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A7_Post_Tumor_Core_Analysis Liver 7,975 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__A8_Pre_Tumor_Core_Analysis Liver 16,601 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B11_Post_Analysis Liver 5,374 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B11_pre_Reg1_Non_Tumor_Analysis Liver 5,372 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B11_pre_Reg1_Tumor_Core_Analysis Liver 718 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B11_pre_Reg2_Non_Tumor_Analysis Liver 625 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B11_pre_Reg2_Tumor_Core_Analysis Liver 7,091 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B14_post_Reg1_Tumor_Core_Analysis Liver 1,183 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B14_post_Reg2_Tumor_Core_Analysis Liver 5,968 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B18_post_reg1_Analysis Liver 5,342 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B18_post_reg2_Analysis Liver 3,810 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B19_Post_Tumor_Core Liver 16,504 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B20_Post_Reg1_Non-Tumor_Analysis Liver 4,693 Ready T1T2T3 View
Manifest Topology summary
HCC_39965889__PCF_CODEX__B20_Post_Reg1_Tumor_Core_Analysis Liver 10,476 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B20_Post_Reg2_Tumor_Core_Analysis Liver 16,837 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B2_Post2_Tumor_Core_Analysis Liver 6,339 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B2_Post_Tumor_Core_Analysis Liver 25,159 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B3_Post2_Analysis Liver 33,773 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B4_pre_Tumor_Core_Analysis Liver 15,449 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg1_Non_Tumor_Analysis Liver 7,327 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg1_Tumor_Core_Analysis Liver 7,917 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B6_Post_Reg2_Tumor_Core_Analysis Liver 20,734 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_Pre_Non_Tumor_Analysis Liver 28,534 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_Pre_Tumor_Core_Analysis Liver 11,303 NA T1T2T3 View NA
HCC_39965889__PCF_CODEX__B7_post_Tumor_Core_Analysis Liver 4,913 Ready T1T2T3 View
Manifest Topology summary