scAtria single-cell spatial atlas resource

LiverCancer_41723121 HCC cohort · CosMx SMI / NanoString SMI

LiverCancer_41723121 HCC cohort · HCC_41723121__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered PMID 41723121 DOI 10.1038/s41467-026-69797-z
Overview Curated
Samples9 samples
Cells1,446,124
DEG analysesNot ready
Spatial analysesNot ready 0/9 samples
AnnotationCurated tiered
Organs
Liver 9
Reference
Tumor cell villages define the co-dependency of tumor and microenvironment in liver cancer
Liu M, Hernandez MO, Castven D, Lee HP, Wu W, Wang L, Forgues M, Hernandez JM et al.
Nature Communications | 2026
PMID 41723121 · DOI 10.1038/s41467-026-69797-z
PubMed PMID 41723121 DOI 10.1038/s41467-026-69797-z
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LiverCancer_41723121 iCCA cohort · CosMx SMI / NanoString SMI CosMx SMI / NanoString SMI | Spatial transcriptomics | 6 samples | 901,465 cells