scAtria single-cell spatial atlas resource

HGSC_39179931 · CosMx SMI / NanoString SMI

HGSC_39179931 · HGSC_39179931__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-50 of 166
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

122 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HGSC_39179931__CosMx_SMI__HGSC1 Ovary 542,559 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC113 Ovary 98,482 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC2 Ovary 211,472 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC8 Ovary 294,699 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__SMI6K_1_F00003 Ovary 961 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00006 Ovary 652 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00007 Ovary 642 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00011 Ovary 2,107 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00012 Ovary 528 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00016 Ovary 2,392 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00027 Ovary 798 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00028 Ovary 759 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00030 Ovary 427 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00032 Ovary 573 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00033 Ovary 1,854 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00035 Ovary 844 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00039 Ovary 588 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00041 Ovary 1,413 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00044 Ovary 642 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00046 Ovary 1,123 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00049 Ovary 235 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00001 Ovary 1,840 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00002 Ovary 1,454 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00003 Ovary 2,089 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00004 Ovary 584 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00005 Ovary 1,635 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00006 Ovary 3,012 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00007 Ovary 2,534 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00008 Ovary 2,067 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00009 Ovary 2,089 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00010 Ovary 770 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00011 Ovary 1,238 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00012 Ovary 1,545 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00013 Ovary 1,321 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00014 Ovary 773 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00015 Ovary 506 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00016 Ovary 1,326 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00017 Ovary 756 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00018 Ovary 755 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00019 Ovary 2,221 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00020 Ovary 1,784 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00021 Ovary 1,801 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00022 Ovary 1,037 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00023 Ovary 782 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00024 Ovary 1,531 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00025 Ovary 1,751 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00026 Ovary 1,664 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00027 Ovary 1,766 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00028 Ovary 470 Ready T1T2T3 View
Manifest Domain summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00029 Ovary 1,201 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

122 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HGSC_39179931__CosMx_SMI__HGSC1 Ovary 542,559 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC113 Ovary 98,482 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC2 Ovary 211,472 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC8 Ovary 294,699 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__SMI6K_1_F00003 Ovary 961 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00006 Ovary 652 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00007 Ovary 642 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00011 Ovary 2,107 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00012 Ovary 528 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00016 Ovary 2,392 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00027 Ovary 798 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00028 Ovary 759 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00030 Ovary 427 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00032 Ovary 573 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00033 Ovary 1,854 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00035 Ovary 844 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00039 Ovary 588 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00041 Ovary 1,413 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00044 Ovary 642 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00046 Ovary 1,123 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00049 Ovary 235 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00001 Ovary 1,840 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00002 Ovary 1,454 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00003 Ovary 2,089 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00004 Ovary 584 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00005 Ovary 1,635 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00006 Ovary 3,012 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00007 Ovary 2,534 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00008 Ovary 2,067 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00009 Ovary 2,089 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00010 Ovary 770 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00011 Ovary 1,238 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00012 Ovary 1,545 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00013 Ovary 1,321 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00014 Ovary 773 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00015 Ovary 506 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00016 Ovary 1,326 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00017 Ovary 756 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00018 Ovary 755 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00019 Ovary 2,221 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00020 Ovary 1,784 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00021 Ovary 1,801 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00022 Ovary 1,037 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00023 Ovary 782 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00024 Ovary 1,531 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00025 Ovary 1,751 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00026 Ovary 1,664 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00027 Ovary 1,766 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00028 Ovary 470 Ready T1T2T3 View
Manifest Pair summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00029 Ovary 1,201 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

122 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HGSC_39179931__CosMx_SMI__HGSC1 Ovary 542,559 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC113 Ovary 98,482 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC2 Ovary 211,472 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__HGSC8 Ovary 294,699 NA T1T2T3 View NA
HGSC_39179931__CosMx_SMI__SMI6K_1_F00003 Ovary 961 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00006 Ovary 652 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00007 Ovary 642 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00011 Ovary 2,107 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00012 Ovary 528 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00016 Ovary 2,392 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00027 Ovary 798 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00028 Ovary 759 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00030 Ovary 427 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00032 Ovary 573 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00033 Ovary 1,854 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00035 Ovary 844 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00039 Ovary 588 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00041 Ovary 1,413 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00044 Ovary 642 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00046 Ovary 1,123 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_1_F00049 Ovary 235 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00001 Ovary 1,840 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00002 Ovary 1,454 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00003 Ovary 2,089 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00004 Ovary 584 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00005 Ovary 1,635 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00006 Ovary 3,012 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00007 Ovary 2,534 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00008 Ovary 2,067 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00009 Ovary 2,089 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00010 Ovary 770 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00011 Ovary 1,238 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00012 Ovary 1,545 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00013 Ovary 1,321 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00014 Ovary 773 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00015 Ovary 506 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00016 Ovary 1,326 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00017 Ovary 756 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00018 Ovary 755 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00019 Ovary 2,221 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00020 Ovary 1,784 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00021 Ovary 1,801 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00022 Ovary 1,037 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00023 Ovary 782 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00024 Ovary 1,531 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00025 Ovary 1,751 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00026 Ovary 1,664 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00027 Ovary 1,766 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00028 Ovary 470 Ready T1T2T3 View
Manifest Topology summary
HGSC_39179931__CosMx_SMI__SMI6K_2_F00029 Ovary 1,201 Ready T1T2T3 View
Manifest Topology summary