HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort ยท HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered PMID 41616773 DOI 10.1016/j.ccell.2026.01.003
Samples

Sample manifest

151-200 of 390
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state ?Broad public sample state used for filtering and comparison: Healthy/control, Primary cancer, Metastatic cancer, or Non-cancer disease. Disease detail ?More specific disease or condition text curated at sample level when available. Cells Curation ?Curated records have standardized ontology labels and normalized metadata. Source records are ingested but not fully standardized yet. Spatial modules ?Lists public spatial modules with available outputs for this sample. Missing or not-applicable values are not biological zeros.
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg016 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,930 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg020 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,621 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg023 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,889 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg024 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,329 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg026 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,579 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg027 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,687 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg028 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,299 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg029 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,353 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg031 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,422 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg032 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,113 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg033 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,761 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg034 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,570 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg035 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,098 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg037 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 9,193 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg038 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 4,264 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg039 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,393 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg040 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,142 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg043 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,462 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg044 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,010 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg047 Head and neck Primary cancer Head and neck squamous cell carcinoma 4,072 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg048 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,992 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg049 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,864 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg050 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 7,063 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg051 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 9,701 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg052 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 9,847 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg053 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,873 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg054 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,323 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg056 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,542 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg057 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,889 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg058 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 7,347 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg059 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,837 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg060 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,031 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg061 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,477 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg062 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,202 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg063 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,341 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg064 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,428 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg065 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,230 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg066 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,906 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg067 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,265 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg068 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,837 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg070 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,015 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg071 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 5,465 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg072 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,309 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg073 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,014 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg074 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,580 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg075 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,886 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg076 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,479 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg077 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 4,843 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg078 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 4,705 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg079 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 9,205 Curated Domains, Interaction, Topology