HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort ยท HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered PMID 41616773 DOI 10.1016/j.ccell.2026.01.003
Samples

Sample manifest

201-250 of 390
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg080 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 4,907 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg081 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,840 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg082 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,891 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg084 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,870 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg085 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,179 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg086 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,810 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg001 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 4,098 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg003 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,934 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg004 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,188 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg006 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,923 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg007 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,114 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg008 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,352 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg009 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,762 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg010 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,461 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg011 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,574 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg013 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,869 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg014 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,821 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg015 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,218 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg017 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,661 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg018 Head and neck Primary cancer Head and neck squamous cell carcinoma 5,254 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg019 Head and neck Primary cancer Head and neck squamous cell carcinoma 7,052 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg020 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 4,045 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg021 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,818 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg023 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,027 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg024 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,993 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg025 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,425 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg026 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,843 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg027 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,207 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg028 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,375 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg029 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,189 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg032 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,435 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg033 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,031 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg036 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,439 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg037 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,556 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg039 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,121 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg040 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,561 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg041 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,669 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg042 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,373 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg043 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 7,063 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg044 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 8,569 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg045 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,392 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg046 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,195 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg047 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,314 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg048 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,134 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg049 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,827 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg050 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,510 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg051 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 8,578 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg052 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,879 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg053 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,131 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg054 Head and neck Primary cancer Head and neck squamous cell carcinoma 4,088 Curated Domains, Interaction, Topology