scAtria single-cell spatial atlas resource

HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort · HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

201-250 of 390
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg080 Lymphoid tissue 4,907 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg081 Lymph node metastasis 2,840 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg082 Lymph node metastasis 1,891 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg084 Lymphoid tissue 8,870 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg085 Head and neck 3,179 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg086 Head and neck 2,810 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg001 Lymph node metastasis 4,098 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg003 Head and neck 2,934 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg004 Head and neck 3,188 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg006 Lymph node metastasis 1,923 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg007 Lymph node metastasis 3,114 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg008 Lymph node metastasis 1,352 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg009 Lymphoid tissue 6,762 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg010 Head and neck 2,461 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg011 Head and neck 3,574 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg013 Lymphoid tissue 8,869 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg014 Head and neck 1,821 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg015 Head and neck 2,218 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg017 Head and neck 2,661 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg018 Head and neck 5,254 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg019 Head and neck 7,052 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg020 Lymph node metastasis 4,045 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg021 Lymph node metastasis 3,818 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg023 Lymphoid tissue 7,027 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg024 Head and neck 1,993 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg025 Head and neck 1,425 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg026 Head and neck 1,843 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg027 Lymphoid tissue 7,207 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg028 Head and neck 1,375 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg029 Head and neck 2,189 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg032 Head and neck 3,435 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg033 Head and neck 3,031 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg036 Head and neck 1,439 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg037 Head and neck 1,556 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg039 Lymph node metastasis 2,121 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg040 Lymph node metastasis 2,561 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg041 Lymphoid tissue 6,669 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg042 Lymph node metastasis 1,373 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg043 Lymph node metastasis 7,063 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg044 Lymph node metastasis 8,569 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg045 Lymphoid tissue 7,392 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg046 Head and neck 2,195 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg047 Head and neck 2,314 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg048 Head and neck 3,134 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg049 Lymph node metastasis 1,827 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg050 Lymph node metastasis 2,510 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg051 Lymph node metastasis 8,578 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg052 Lymphoid tissue 6,879 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg053 Head and neck 3,131 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg054 Head and neck 4,088 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg080 Lymphoid tissue 4,907 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg081 Lymph node metastasis 2,840 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg082 Lymph node metastasis 1,891 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg084 Lymphoid tissue 8,870 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg085 Head and neck 3,179 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg086 Head and neck 2,810 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg001 Lymph node metastasis 4,098 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg003 Head and neck 2,934 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg004 Head and neck 3,188 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg006 Lymph node metastasis 1,923 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg007 Lymph node metastasis 3,114 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg008 Lymph node metastasis 1,352 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg009 Lymphoid tissue 6,762 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg010 Head and neck 2,461 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg011 Head and neck 3,574 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg013 Lymphoid tissue 8,869 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg014 Head and neck 1,821 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg015 Head and neck 2,218 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg017 Head and neck 2,661 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg018 Head and neck 5,254 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg019 Head and neck 7,052 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg020 Lymph node metastasis 4,045 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg021 Lymph node metastasis 3,818 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg023 Lymphoid tissue 7,027 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg024 Head and neck 1,993 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg025 Head and neck 1,425 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg026 Head and neck 1,843 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg027 Lymphoid tissue 7,207 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg028 Head and neck 1,375 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg029 Head and neck 2,189 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg032 Head and neck 3,435 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg033 Head and neck 3,031 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg036 Head and neck 1,439 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg037 Head and neck 1,556 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg039 Lymph node metastasis 2,121 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg040 Lymph node metastasis 2,561 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg041 Lymphoid tissue 6,669 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg042 Lymph node metastasis 1,373 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg043 Lymph node metastasis 7,063 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg044 Lymph node metastasis 8,569 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg045 Lymphoid tissue 7,392 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg046 Head and neck 2,195 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg047 Head and neck 2,314 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg048 Head and neck 3,134 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg049 Lymph node metastasis 1,827 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg050 Lymph node metastasis 2,510 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg051 Lymph node metastasis 8,578 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg052 Lymphoid tissue 6,879 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg053 Head and neck 3,131 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg054 Head and neck 4,088 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg080 Lymphoid tissue 4,907 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg081 Lymph node metastasis 2,840 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg082 Lymph node metastasis 1,891 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg084 Lymphoid tissue 8,870 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg085 Head and neck 3,179 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S1reg086 Head and neck 2,810 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg001 Lymph node metastasis 4,098 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg003 Head and neck 2,934 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg004 Head and neck 3,188 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg006 Lymph node metastasis 1,923 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg007 Lymph node metastasis 3,114 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg008 Lymph node metastasis 1,352 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg009 Lymphoid tissue 6,762 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg010 Head and neck 2,461 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg011 Head and neck 3,574 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg013 Lymphoid tissue 8,869 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg014 Head and neck 1,821 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg015 Head and neck 2,218 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg017 Head and neck 2,661 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg018 Head and neck 5,254 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg019 Head and neck 7,052 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg020 Lymph node metastasis 4,045 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg021 Lymph node metastasis 3,818 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg023 Lymphoid tissue 7,027 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg024 Head and neck 1,993 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg025 Head and neck 1,425 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg026 Head and neck 1,843 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg027 Lymphoid tissue 7,207 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg028 Head and neck 1,375 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg029 Head and neck 2,189 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg032 Head and neck 3,435 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg033 Head and neck 3,031 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg036 Head and neck 1,439 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg037 Head and neck 1,556 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg039 Lymph node metastasis 2,121 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg040 Lymph node metastasis 2,561 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg041 Lymphoid tissue 6,669 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg042 Lymph node metastasis 1,373 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg043 Lymph node metastasis 7,063 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg044 Lymph node metastasis 8,569 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg045 Lymphoid tissue 7,392 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg046 Head and neck 2,195 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg047 Head and neck 2,314 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg048 Head and neck 3,134 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg049 Lymph node metastasis 1,827 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg050 Lymph node metastasis 2,510 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg051 Lymph node metastasis 8,578 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg052 Lymphoid tissue 6,879 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg053 Head and neck 3,131 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg054 Head and neck 4,088 Ready T1T2T3 View
Manifest Topology summary