scAtria single-cell spatial atlas resource

HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort · HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

251-300 of 390
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg056 Lymph node metastasis 5,304 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg057 Lymph node metastasis 6,278 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg058 Lymphoid tissue 9,534 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg059 Head and neck 2,783 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg060 Head and neck 3,701 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg062 Lymphoid tissue 7,775 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg063 Head and neck 1,011 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg064 Head and neck 2,835 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg065 Head and neck 3,001 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg066 Lymph node metastasis 2,381 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg067 Lymph node metastasis 1,723 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg070 Head and neck 2,991 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg071 Head and neck 2,684 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg072 Head and neck 1,474 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg073 Lymph node metastasis 1,847 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg074 Lymph node metastasis 3,824 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg075 Lymph node metastasis 5,494 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg076 Lymphoid tissue 7,628 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg077 Head and neck 2,273 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg078 Head and neck 3,794 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg080 Lymphoid tissue 8,339 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg001 Lymphoid tissue 8,720 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg003 Head and neck 1,433 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg004 Head and neck 1,238 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg005 Head and neck 2,107 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg006 Lymph node metastasis 1,696 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg007 Lymph node metastasis 1,588 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg008 Lymphoid tissue 8,629 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg009 Head and neck 1,994 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg010 Head and neck 1,750 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg013 Lymph node metastasis 1,881 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg014 Lymph node metastasis 3,052 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg015 Lymph node metastasis 8,016 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg016 Lymphoid tissue 6,936 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg017 Head and neck 1,348 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg018 Head and neck 1,991 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg021 Head and neck 1,638 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg022 Head and neck 2,246 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg023 Head and neck 2,959 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg024 Lymphoid tissue 3,236 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg025 Head and neck 2,473 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg026 Head and neck 2,155 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg029 Head and neck 3,799 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg030 Head and neck 3,141 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg031 Head and neck 2,741 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg032 Lymph node metastasis 3,039 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg033 Lymph node metastasis 3,817 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg034 Lymphoid tissue 2,568 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg035 Head and neck 951 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg036 Head and neck 1,593 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg056 Lymph node metastasis 5,304 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg057 Lymph node metastasis 6,278 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg058 Lymphoid tissue 9,534 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg059 Head and neck 2,783 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg060 Head and neck 3,701 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg062 Lymphoid tissue 7,775 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg063 Head and neck 1,011 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg064 Head and neck 2,835 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg065 Head and neck 3,001 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg066 Lymph node metastasis 2,381 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg067 Lymph node metastasis 1,723 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg070 Head and neck 2,991 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg071 Head and neck 2,684 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg072 Head and neck 1,474 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg073 Lymph node metastasis 1,847 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg074 Lymph node metastasis 3,824 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg075 Lymph node metastasis 5,494 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg076 Lymphoid tissue 7,628 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg077 Head and neck 2,273 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg078 Head and neck 3,794 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg080 Lymphoid tissue 8,339 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg001 Lymphoid tissue 8,720 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg003 Head and neck 1,433 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg004 Head and neck 1,238 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg005 Head and neck 2,107 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg006 Lymph node metastasis 1,696 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg007 Lymph node metastasis 1,588 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg008 Lymphoid tissue 8,629 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg009 Head and neck 1,994 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg010 Head and neck 1,750 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg013 Lymph node metastasis 1,881 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg014 Lymph node metastasis 3,052 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg015 Lymph node metastasis 8,016 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg016 Lymphoid tissue 6,936 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg017 Head and neck 1,348 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg018 Head and neck 1,991 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg021 Head and neck 1,638 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg022 Head and neck 2,246 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg023 Head and neck 2,959 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg024 Lymphoid tissue 3,236 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg025 Head and neck 2,473 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg026 Head and neck 2,155 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg029 Head and neck 3,799 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg030 Head and neck 3,141 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg031 Head and neck 2,741 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg032 Lymph node metastasis 3,039 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg033 Lymph node metastasis 3,817 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg034 Lymphoid tissue 2,568 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg035 Head and neck 951 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg036 Head and neck 1,593 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg056 Lymph node metastasis 5,304 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg057 Lymph node metastasis 6,278 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg058 Lymphoid tissue 9,534 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg059 Head and neck 2,783 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg060 Head and neck 3,701 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg062 Lymphoid tissue 7,775 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg063 Head and neck 1,011 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg064 Head and neck 2,835 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg065 Head and neck 3,001 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg066 Lymph node metastasis 2,381 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg067 Lymph node metastasis 1,723 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg070 Head and neck 2,991 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg071 Head and neck 2,684 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg072 Head and neck 1,474 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg073 Lymph node metastasis 1,847 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg074 Lymph node metastasis 3,824 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg075 Lymph node metastasis 5,494 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg076 Lymphoid tissue 7,628 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg077 Head and neck 2,273 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg078 Head and neck 3,794 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg080 Lymphoid tissue 8,339 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg001 Lymphoid tissue 8,720 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg003 Head and neck 1,433 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg004 Head and neck 1,238 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg005 Head and neck 2,107 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg006 Lymph node metastasis 1,696 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg007 Lymph node metastasis 1,588 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg008 Lymphoid tissue 8,629 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg009 Head and neck 1,994 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg010 Head and neck 1,750 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg013 Lymph node metastasis 1,881 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg014 Lymph node metastasis 3,052 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg015 Lymph node metastasis 8,016 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg016 Lymphoid tissue 6,936 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg017 Head and neck 1,348 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg018 Head and neck 1,991 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg021 Head and neck 1,638 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg022 Head and neck 2,246 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg023 Head and neck 2,959 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg024 Lymphoid tissue 3,236 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg025 Head and neck 2,473 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg026 Head and neck 2,155 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg029 Head and neck 3,799 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg030 Head and neck 3,141 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg031 Head and neck 2,741 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg032 Lymph node metastasis 3,039 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg033 Lymph node metastasis 3,817 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg034 Lymphoid tissue 2,568 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg035 Head and neck 951 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg036 Head and neck 1,593 Ready T1T2T3 View
Manifest Topology summary