scAtria single-cell spatial atlas resource

HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort · HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

351-390 of 390
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg019 Lymph node metastasis 6,450 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg020 Lymphoid tissue 5,421 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg021 Head and neck 2,242 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg022 Head and neck 2,830 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg023 Head and neck 2,777 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg024 Lymph node metastasis 3,781 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg025 Lymph node metastasis 2,171 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg026 Lymphoid tissue 8,801 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg027 Head and neck 3,826 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg028 Lymph node metastasis 4,692 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg029 Lymph node metastasis 7,954 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg030 Lymph node metastasis 10,831 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg031 Lymphoid tissue 8,707 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg032 Head and neck 2,010 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg033 Head and neck 3,539 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg035 Head and neck 1,116 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg036 Head and neck 1,034 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg038 Head and neck 2,497 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg039 Head and neck 1,970 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg040 Head and neck 2,964 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg041 Lymph node metastasis 970 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg042 Lymph node metastasis 3,325 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg043 Lymph node metastasis 7,088 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg044 Lymphoid tissue 9,248 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg045 Lymph node metastasis 6,261 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg046 Lymphoid tissue 5,732 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg047 Head and neck 3,667 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg048 Head and neck 3,411 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg051 Head and neck 3,119 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg052 Head and neck 2,936 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg053 Head and neck 2,210 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg054 Lymphoid tissue 3,706 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg055 Head and neck 2,284 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg056 Head and neck 1,592 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg059 Lymph node metastasis 3,781 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg060 Lymph node metastasis 2,293 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg061 Lymph node metastasis 8,952 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg062 Lymphoid tissue 10,235 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg063 Head and neck 3,760 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg064 Head and neck 2,745 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg019 Lymph node metastasis 6,450 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg020 Lymphoid tissue 5,421 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg021 Head and neck 2,242 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg022 Head and neck 2,830 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg023 Head and neck 2,777 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg024 Lymph node metastasis 3,781 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg025 Lymph node metastasis 2,171 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg026 Lymphoid tissue 8,801 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg027 Head and neck 3,826 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg028 Lymph node metastasis 4,692 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg029 Lymph node metastasis 7,954 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg030 Lymph node metastasis 10,831 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg031 Lymphoid tissue 8,707 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg032 Head and neck 2,010 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg033 Head and neck 3,539 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg035 Head and neck 1,116 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg036 Head and neck 1,034 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg038 Head and neck 2,497 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg039 Head and neck 1,970 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg040 Head and neck 2,964 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg041 Lymph node metastasis 970 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg042 Lymph node metastasis 3,325 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg043 Lymph node metastasis 7,088 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg044 Lymphoid tissue 9,248 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg045 Lymph node metastasis 6,261 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg046 Lymphoid tissue 5,732 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg047 Head and neck 3,667 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg048 Head and neck 3,411 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg051 Head and neck 3,119 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg052 Head and neck 2,936 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg053 Head and neck 2,210 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg054 Lymphoid tissue 3,706 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg055 Head and neck 2,284 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg056 Head and neck 1,592 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg059 Lymph node metastasis 3,781 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg060 Lymph node metastasis 2,293 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg061 Lymph node metastasis 8,952 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg062 Lymphoid tissue 10,235 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg063 Head and neck 3,760 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg064 Head and neck 2,745 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

390 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg019 Lymph node metastasis 6,450 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg020 Lymphoid tissue 5,421 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg021 Head and neck 2,242 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg022 Head and neck 2,830 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg023 Head and neck 2,777 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg024 Lymph node metastasis 3,781 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg025 Lymph node metastasis 2,171 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg026 Lymphoid tissue 8,801 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg027 Head and neck 3,826 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg028 Lymph node metastasis 4,692 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg029 Lymph node metastasis 7,954 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg030 Lymph node metastasis 10,831 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg031 Lymphoid tissue 8,707 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg032 Head and neck 2,010 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg033 Head and neck 3,539 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg035 Head and neck 1,116 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg036 Head and neck 1,034 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg038 Head and neck 2,497 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg039 Head and neck 1,970 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg040 Head and neck 2,964 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg041 Lymph node metastasis 970 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg042 Lymph node metastasis 3,325 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg043 Lymph node metastasis 7,088 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg044 Lymphoid tissue 9,248 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg045 Lymph node metastasis 6,261 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg046 Lymphoid tissue 5,732 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg047 Head and neck 3,667 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg048 Head and neck 3,411 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg051 Head and neck 3,119 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg052 Head and neck 2,936 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg053 Head and neck 2,210 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg054 Lymphoid tissue 3,706 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg055 Head and neck 2,284 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg056 Head and neck 1,592 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg059 Lymph node metastasis 3,781 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg060 Lymph node metastasis 2,293 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg061 Lymph node metastasis 8,952 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg062 Lymphoid tissue 10,235 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg063 Head and neck 3,760 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg064 Head and neck 2,745 Ready T1T2T3 View
Manifest Topology summary