HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort ยท HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered PMID 41616773 DOI 10.1016/j.ccell.2026.01.003
Samples

Sample manifest

1-50 of 390
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg001 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,013 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg003 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,162 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg004 Head and neck Primary cancer Head and neck squamous cell carcinoma 991 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg007 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,016 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg008 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,061 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg009 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,700 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg010 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 4,329 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg011 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,533 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg012 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,349 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg014 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,914 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg015 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,440 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg016 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,558 Curated NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg017 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,876 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg018 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,429 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg019 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,347 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg020 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,501 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg021 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 5,249 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg023 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 5,431 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg024 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,161 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg025 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,705 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg027 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,472 Curated NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg028 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,316 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg029 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,623 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg031 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,101 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg032 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,990 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg035 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,094 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg036 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,830 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg039 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,475 Curated NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg040 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,239 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg042 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 5,369 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg043 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,346 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg044 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,667 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg047 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,170 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg048 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,539 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg050 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,241 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg052 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 4,829 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg053 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,434 Curated NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg054 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,545 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg055 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,960 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg058 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,524 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg059 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,523 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg061 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,503 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg062 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 5,313 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg063 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 7,514 Curated NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg064 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 4,676 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg065 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,659 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg066 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,941 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg068 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,100 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg069 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,616 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg072 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,000 Curated Domains, Interaction, Topology