scAtria single-cell spatial atlas resource

HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort · HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-50 of 390
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

293 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg001 Head and neck 2,013 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg003 Head and neck 2,162 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg004 Head and neck 991 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg007 Lymph node metastasis 1,016 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg008 Lymph node metastasis 3,061 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg009 Lymph node metastasis 2,700 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg010 Lymphoid tissue 4,329 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg011 Head and neck 2,533 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg012 Head and neck 2,349 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg014 Lymph node metastasis 1,914 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg015 Lymph node metastasis 3,440 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg016 Lymphoid tissue 8,558 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg017 Head and neck 2,876 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg018 Head and neck 2,429 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg019 Head and neck 3,347 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg020 Lymph node metastasis 2,501 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg021 Lymph node metastasis 5,249 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg023 Lymphoid tissue 5,431 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg024 Head and neck 2,161 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg025 Head and neck 2,705 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg027 Lymphoid tissue 6,472 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg028 Head and neck 2,316 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg029 Head and neck 2,623 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg031 Head and neck 3,101 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg032 Head and neck 2,990 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg035 Head and neck 3,094 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg036 Head and neck 3,830 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg039 Lymphoid tissue 6,475 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg040 Head and neck 1,239 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg042 Lymphoid tissue 5,369 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg043 Head and neck 2,346 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg044 Head and neck 1,667 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg047 Head and neck 1,170 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg048 Head and neck 1,539 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg050 Lymph node metastasis 1,241 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg052 Lymph node metastasis 4,829 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg053 Lymphoid tissue 7,434 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg054 Head and neck 3,545 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg055 Head and neck 2,960 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg058 Head and neck 2,524 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg059 Head and neck 2,523 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg061 Lymph node metastasis 2,503 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg062 Lymph node metastasis 5,313 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg063 Lymph node metastasis 7,514 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg064 Lymphoid tissue 4,676 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg065 Head and neck 2,659 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg066 Head and neck 2,941 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg068 Head and neck 1,100 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg069 Head and neck 1,616 Ready T1T2T3 View
Manifest Domain summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg072 Head and neck 2,000 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

293 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg001 Head and neck 2,013 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg003 Head and neck 2,162 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg004 Head and neck 991 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg007 Lymph node metastasis 1,016 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg008 Lymph node metastasis 3,061 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg009 Lymph node metastasis 2,700 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg010 Lymphoid tissue 4,329 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg011 Head and neck 2,533 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg012 Head and neck 2,349 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg014 Lymph node metastasis 1,914 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg015 Lymph node metastasis 3,440 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg016 Lymphoid tissue 8,558 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg017 Head and neck 2,876 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg018 Head and neck 2,429 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg019 Head and neck 3,347 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg020 Lymph node metastasis 2,501 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg021 Lymph node metastasis 5,249 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg023 Lymphoid tissue 5,431 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg024 Head and neck 2,161 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg025 Head and neck 2,705 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg027 Lymphoid tissue 6,472 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg028 Head and neck 2,316 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg029 Head and neck 2,623 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg031 Head and neck 3,101 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg032 Head and neck 2,990 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg035 Head and neck 3,094 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg036 Head and neck 3,830 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg039 Lymphoid tissue 6,475 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg040 Head and neck 1,239 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg042 Lymphoid tissue 5,369 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg043 Head and neck 2,346 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg044 Head and neck 1,667 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg047 Head and neck 1,170 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg048 Head and neck 1,539 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg050 Lymph node metastasis 1,241 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg052 Lymph node metastasis 4,829 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg053 Lymphoid tissue 7,434 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg054 Head and neck 3,545 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg055 Head and neck 2,960 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg058 Head and neck 2,524 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg059 Head and neck 2,523 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg061 Lymph node metastasis 2,503 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg062 Lymph node metastasis 5,313 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg063 Lymph node metastasis 7,514 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg064 Lymphoid tissue 4,676 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg065 Head and neck 2,659 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg066 Head and neck 2,941 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg068 Head and neck 1,100 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg069 Head and neck 1,616 Ready T1T2T3 View
Manifest Pair summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg072 Head and neck 2,000 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

293 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg001 Head and neck 2,013 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg003 Head and neck 2,162 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg004 Head and neck 991 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg007 Lymph node metastasis 1,016 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg008 Lymph node metastasis 3,061 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg009 Lymph node metastasis 2,700 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg010 Lymphoid tissue 4,329 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg011 Head and neck 2,533 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg012 Head and neck 2,349 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg014 Lymph node metastasis 1,914 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg015 Lymph node metastasis 3,440 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg016 Lymphoid tissue 8,558 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg017 Head and neck 2,876 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg018 Head and neck 2,429 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg019 Head and neck 3,347 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg020 Lymph node metastasis 2,501 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg021 Lymph node metastasis 5,249 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg023 Lymphoid tissue 5,431 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg024 Head and neck 2,161 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg025 Head and neck 2,705 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg027 Lymphoid tissue 6,472 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg028 Head and neck 2,316 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg029 Head and neck 2,623 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg031 Head and neck 3,101 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg032 Head and neck 2,990 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg035 Head and neck 3,094 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg036 Head and neck 3,830 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg039 Lymphoid tissue 6,475 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg040 Head and neck 1,239 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg042 Lymphoid tissue 5,369 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg043 Head and neck 2,346 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg044 Head and neck 1,667 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg047 Head and neck 1,170 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg048 Head and neck 1,539 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg050 Lymph node metastasis 1,241 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg052 Lymph node metastasis 4,829 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg053 Lymphoid tissue 7,434 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg054 Head and neck 3,545 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg055 Head and neck 2,960 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg058 Head and neck 2,524 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg059 Head and neck 2,523 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg061 Lymph node metastasis 2,503 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg062 Lymph node metastasis 5,313 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg063 Lymph node metastasis 7,514 NA T1T2T3 View NA
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg064 Lymphoid tissue 4,676 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg065 Head and neck 2,659 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg066 Head and neck 2,941 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg068 Head and neck 1,100 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg069 Head and neck 1,616 Ready T1T2T3 View
Manifest Topology summary
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg072 Head and neck 2,000 Ready T1T2T3 View
Manifest Topology summary