scAtria single-cell spatial atlas resource

HNSCC_41616773 · Other ST

HNSCC_41616773 · HNSCC_41616773__Other_ST

Other ST Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-50 of 137
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

49 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCC_41616773__Other_ST__TMA1_reg001 Lymphoid tissue 5,388 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg002 Lymphoid tissue 5,339 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg003 Lymph node metastasis 6,432 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg004 Lymph node metastasis 13,134 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg005 Lymphoid tissue 6,389 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg006 Lymphoid tissue 5,352 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg007 Lymphoid tissue 7,880 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg008 Lymphoid tissue 4,195 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg009 Lymphoid tissue 4,442 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg010 Lymph node metastasis 4,400 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg011 Lymphoid tissue 7,334 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg012 Lymphoid tissue 18,567 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg013 Lymphoid tissue 6,311 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg014 Lymphoid tissue 7,854 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg015 Lymphoid tissue 8,324 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg016 Lymphoid tissue 17,105 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg017 Lymphoid tissue 13,563 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg018 Lymph node metastasis 3,627 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg019 Lymphoid tissue 6,567 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg021 Lymphoid tissue 2,714 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg022 Lymph node metastasis 3,574 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg023 Lymphoid tissue 2,570 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg024 Lymphoid tissue 6,302 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg025 Lymphoid tissue 816 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg026 Lymph node metastasis 22,598 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg027 Lymph node metastasis 22,700 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg028 Lymphoid tissue 6,286 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg029 Lymphoid tissue 8,443 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg030 Lymphoid tissue 3,234 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg031 Lymph node metastasis 9,605 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg032 Lymphoid tissue 2,983 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg033 Lymphoid tissue 3,938 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg034 Lymphoid tissue 3,160 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg035 Lymph node metastasis 2,381 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg036 Lymphoid tissue 989 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg037 Lymphoid tissue 1,499 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg038 Lymph node metastasis 9,035 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg039 Lymphoid tissue 21,284 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg040 Lymph node metastasis 21,723 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg041 Lymphoid tissue 10,899 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg042 Lymphoid tissue 1,278 Ready T1T2T3 View
Manifest Domain summary
HNSCC_41616773__Other_ST__TMA1_reg043 Lymphoid tissue 6,967 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg044 Lymph node metastasis 9,079 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg045 Lymphoid tissue 7,332 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg046 Lymph node metastasis 9,675 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg047 Lymph node metastasis 22,051 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg048 Lymphoid tissue 7,630 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg049 Lymphoid tissue 18,321 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg050 Lymphoid tissue 11,900 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg051 Lymphoid tissue 7,289 NA T1T2T3 View NA
Interaction Propensity

Cell-type contact samples

49 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCC_41616773__Other_ST__TMA1_reg001 Lymphoid tissue 5,388 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg002 Lymphoid tissue 5,339 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg003 Lymph node metastasis 6,432 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg004 Lymph node metastasis 13,134 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg005 Lymphoid tissue 6,389 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg006 Lymphoid tissue 5,352 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg007 Lymphoid tissue 7,880 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg008 Lymphoid tissue 4,195 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg009 Lymphoid tissue 4,442 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg010 Lymph node metastasis 4,400 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg011 Lymphoid tissue 7,334 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg012 Lymphoid tissue 18,567 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg013 Lymphoid tissue 6,311 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg014 Lymphoid tissue 7,854 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg015 Lymphoid tissue 8,324 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg016 Lymphoid tissue 17,105 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg017 Lymphoid tissue 13,563 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg018 Lymph node metastasis 3,627 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg019 Lymphoid tissue 6,567 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg021 Lymphoid tissue 2,714 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg022 Lymph node metastasis 3,574 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg023 Lymphoid tissue 2,570 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg024 Lymphoid tissue 6,302 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg025 Lymphoid tissue 816 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg026 Lymph node metastasis 22,598 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg027 Lymph node metastasis 22,700 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg028 Lymphoid tissue 6,286 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg029 Lymphoid tissue 8,443 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg030 Lymphoid tissue 3,234 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg031 Lymph node metastasis 9,605 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg032 Lymphoid tissue 2,983 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg033 Lymphoid tissue 3,938 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg034 Lymphoid tissue 3,160 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg035 Lymph node metastasis 2,381 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg036 Lymphoid tissue 989 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg037 Lymphoid tissue 1,499 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg038 Lymph node metastasis 9,035 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg039 Lymphoid tissue 21,284 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg040 Lymph node metastasis 21,723 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg041 Lymphoid tissue 10,899 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg042 Lymphoid tissue 1,278 Ready T1T2T3 View
Manifest Pair summary
HNSCC_41616773__Other_ST__TMA1_reg043 Lymphoid tissue 6,967 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg044 Lymph node metastasis 9,079 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg045 Lymphoid tissue 7,332 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg046 Lymph node metastasis 9,675 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg047 Lymph node metastasis 22,051 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg048 Lymphoid tissue 7,630 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg049 Lymphoid tissue 18,321 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg050 Lymphoid tissue 11,900 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg051 Lymphoid tissue 7,289 NA T1T2T3 View NA
Network Topology

Graph-topology samples

49 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
HNSCC_41616773__Other_ST__TMA1_reg001 Lymphoid tissue 5,388 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg002 Lymphoid tissue 5,339 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg003 Lymph node metastasis 6,432 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg004 Lymph node metastasis 13,134 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg005 Lymphoid tissue 6,389 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg006 Lymphoid tissue 5,352 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg007 Lymphoid tissue 7,880 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg008 Lymphoid tissue 4,195 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg009 Lymphoid tissue 4,442 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg010 Lymph node metastasis 4,400 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg011 Lymphoid tissue 7,334 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg012 Lymphoid tissue 18,567 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg013 Lymphoid tissue 6,311 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg014 Lymphoid tissue 7,854 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg015 Lymphoid tissue 8,324 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg016 Lymphoid tissue 17,105 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg017 Lymphoid tissue 13,563 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg018 Lymph node metastasis 3,627 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg019 Lymphoid tissue 6,567 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg021 Lymphoid tissue 2,714 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg022 Lymph node metastasis 3,574 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg023 Lymphoid tissue 2,570 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg024 Lymphoid tissue 6,302 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg025 Lymphoid tissue 816 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg026 Lymph node metastasis 22,598 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg027 Lymph node metastasis 22,700 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg028 Lymphoid tissue 6,286 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg029 Lymphoid tissue 8,443 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg030 Lymphoid tissue 3,234 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg031 Lymph node metastasis 9,605 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg032 Lymphoid tissue 2,983 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg033 Lymphoid tissue 3,938 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg034 Lymphoid tissue 3,160 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg035 Lymph node metastasis 2,381 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg036 Lymphoid tissue 989 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg037 Lymphoid tissue 1,499 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg038 Lymph node metastasis 9,035 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg039 Lymphoid tissue 21,284 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg040 Lymph node metastasis 21,723 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg041 Lymphoid tissue 10,899 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg042 Lymphoid tissue 1,278 Ready T1T2T3 View
Manifest Topology summary
HNSCC_41616773__Other_ST__TMA1_reg043 Lymphoid tissue 6,967 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg044 Lymph node metastasis 9,079 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg045 Lymphoid tissue 7,332 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg046 Lymph node metastasis 9,675 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg047 Lymph node metastasis 22,051 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg048 Lymphoid tissue 7,630 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg049 Lymphoid tissue 18,321 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg050 Lymphoid tissue 11,900 NA T1T2T3 View NA
HNSCC_41616773__Other_ST__TMA1_reg051 Lymphoid tissue 7,289 NA T1T2T3 View NA