scAtria single-cell spatial atlas resource

IBD_42049732 · CosMx SMI / NanoString SMI

IBD_42049732 · IBD_42049732__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered PMID 42049732 DOI 10.1038/s41467-026-72482-w
Samples

Sample manifest

1-34 of 34
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
IBD_42049732__CosMx_SMI__FOV_1 Large intestine Non-cancer disease Inflammatory bowel disease 1,027 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_10 Large intestine Non-cancer disease Inflammatory bowel disease 284 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_11 Large intestine Non-cancer disease Inflammatory bowel disease 965 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_12 Large intestine Non-cancer disease Inflammatory bowel disease 1,209 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_13 Large intestine Non-cancer disease Inflammatory bowel disease 449 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_14 Large intestine Non-cancer disease Inflammatory bowel disease 379 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_15 Large intestine Non-cancer disease Inflammatory bowel disease 2,086 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_16 Large intestine Non-cancer disease Inflammatory bowel disease 1,087 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_17 Large intestine Non-cancer disease Inflammatory bowel disease 775 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_18 Large intestine Non-cancer disease Inflammatory bowel disease 253 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_19 Large intestine Non-cancer disease Inflammatory bowel disease 1,209 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_2 Large intestine Non-cancer disease Inflammatory bowel disease 1,777 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_20 Large intestine Non-cancer disease Inflammatory bowel disease 2,485 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_21 Large intestine Non-cancer disease Inflammatory bowel disease 1,024 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_22 Large intestine Non-cancer disease Inflammatory bowel disease 160 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_23 Large intestine Non-cancer disease Inflammatory bowel disease 477 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_24 Large intestine Non-cancer disease Inflammatory bowel disease 1,991 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_25 Large intestine Non-cancer disease Inflammatory bowel disease 1,786 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_26 Large intestine Non-cancer disease Inflammatory bowel disease 1,171 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_27 Large intestine Non-cancer disease Inflammatory bowel disease 1,183 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_28 Large intestine Non-cancer disease Inflammatory bowel disease 364 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_29 Large intestine Non-cancer disease Inflammatory bowel disease 1,149 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_3 Large intestine Non-cancer disease Inflammatory bowel disease 503 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_30 Large intestine Non-cancer disease Inflammatory bowel disease 2,048 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_31 Large intestine Non-cancer disease Inflammatory bowel disease 1,768 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_32 Large intestine Non-cancer disease Inflammatory bowel disease 1,076 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_33 Large intestine Non-cancer disease Inflammatory bowel disease 1,737 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_34 Large intestine Non-cancer disease Inflammatory bowel disease 1,339 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_4 Large intestine Non-cancer disease Inflammatory bowel disease 1,576 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_5 Large intestine Non-cancer disease Inflammatory bowel disease 2,924 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_6 Large intestine Non-cancer disease Inflammatory bowel disease 1,378 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_7 Large intestine Non-cancer disease Inflammatory bowel disease 2,438 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_8 Large intestine Non-cancer disease Inflammatory bowel disease 1,453 Curated Domains, Interaction, Topology
IBD_42049732__CosMx_SMI__FOV_9 Large intestine Non-cancer disease Inflammatory bowel disease 1,504 Curated Domains, Interaction, Topology