NSCLC_38242124 · IMC / Imaging Mass Cytometry

NSCLC_38242124 · NSCLC_38242124__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered

Network Topology

Network Topology (Tier 1)

2,069 ready
Sample Organ Disease state Cells Q modularity ?Delaunay graph modularity: Q < 0.15 homogeneous; 0.15-0.35 weakly structured; Q >= 0.35 highly modular. r assortativity ?Delaunay graph assortativity: r <= -0.15 highly dispersed; -0.15 to -0.02 weakly mixed; -0.02 to 0.02 neutral; 0.02 to 0.15 weakly segregated; r >= 0.15 highly compartmentalized. Modularity rank Assortativity rank
NSCLC_38242124__IMC__176_C1,7 Lung Primary cancer 4,223 0.10 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C1,8 Lung Primary cancer 3,779 0.28 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C1,9 Lung Primary cancer 4,090 0.30 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,1 Lung Primary cancer 2,409 0.36 0.20 Highly modular Highly compartmentalized
NSCLC_38242124__IMC__176_C2,10 Lung Primary cancer 2,393 0.33 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,11 Lung Primary cancer 2,490 0.30 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,12 Lung Primary cancer 3,252 0.27 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,13 Lung Primary cancer 3,100 0.19 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,14 Lung Primary cancer 3,477 0.14 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,15 Lung Primary cancer 1,355 0.00 0.33 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,2 Lung Primary cancer 4,196 0.37 0.20 Highly modular Highly compartmentalized
NSCLC_38242124__IMC__176_C2,3 Lung Primary cancer 3,670 0.14 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,4 Lung Primary cancer 3,806 0.04 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,5 Lung Primary cancer 3,439 0.34 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,6 Lung Primary cancer 2,739 0.25 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,7 Lung Primary cancer 2,624 0.24 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,8 Lung Primary cancer 3,111 0.25 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,9 Lung Primary cancer 3,920 0.16 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C3,1 Lung Primary cancer 5,581 0.01 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C3,10 Lung Primary cancer 3,932 0.28 0.20 Weakly structured Highly compartmentalized

Network Topology (Tier 2)

2,069 ready
Sample Organ Disease state Cells Q modularity ?Delaunay graph modularity: Q < 0.15 homogeneous; 0.15-0.35 weakly structured; Q >= 0.35 highly modular. r assortativity ?Delaunay graph assortativity: r <= -0.15 highly dispersed; -0.15 to -0.02 weakly mixed; -0.02 to 0.02 neutral; 0.02 to 0.15 weakly segregated; r >= 0.15 highly compartmentalized. Modularity rank Assortativity rank
NSCLC_38242124__IMC__176_C1,7 Lung Primary cancer 4,223 0.10 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C1,8 Lung Primary cancer 3,779 0.30 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C1,9 Lung Primary cancer 4,090 0.30 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,1 Lung Primary cancer 2,409 0.36 0.17 Highly modular Highly compartmentalized
NSCLC_38242124__IMC__176_C2,10 Lung Primary cancer 2,393 0.33 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,11 Lung Primary cancer 2,490 0.30 0.12 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,12 Lung Primary cancer 3,252 0.27 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,13 Lung Primary cancer 3,100 0.19 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,14 Lung Primary cancer 3,477 0.14 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,15 Lung Primary cancer 1,355 0.00 0.33 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,2 Lung Primary cancer 4,196 0.37 0.17 Highly modular Highly compartmentalized
NSCLC_38242124__IMC__176_C2,3 Lung Primary cancer 3,670 0.14 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,4 Lung Primary cancer 3,806 0.04 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,5 Lung Primary cancer 3,439 0.34 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,6 Lung Primary cancer 2,739 0.25 0.12 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,7 Lung Primary cancer 2,624 0.24 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,8 Lung Primary cancer 3,111 0.26 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C2,9 Lung Primary cancer 3,920 0.16 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C3,1 Lung Primary cancer 5,581 0.01 0.15 Homogeneous Weakly segregated
NSCLC_38242124__IMC__176_C3,10 Lung Primary cancer 3,932 0.28 0.17 Weakly structured Highly compartmentalized

Network Topology (Tier 3)

2,069 ready
Sample Organ Disease state Cells Q modularity ?Delaunay graph modularity: Q < 0.15 homogeneous; 0.15-0.35 weakly structured; Q >= 0.35 highly modular. r assortativity ?Delaunay graph assortativity: r <= -0.15 highly dispersed; -0.15 to -0.02 weakly mixed; -0.02 to 0.02 neutral; 0.02 to 0.15 weakly segregated; r >= 0.15 highly compartmentalized. Modularity rank Assortativity rank
NSCLC_38242124__IMC__176_C1,7 Lung Primary cancer 4,223 0.12 0.12 Homogeneous Weakly segregated
NSCLC_38242124__IMC__176_C1,8 Lung Primary cancer 3,779 0.30 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C1,9 Lung Primary cancer 4,090 0.30 0.12 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,1 Lung Primary cancer 2,409 0.36 0.10 Highly modular Weakly segregated
NSCLC_38242124__IMC__176_C2,10 Lung Primary cancer 2,393 0.33 0.08 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,11 Lung Primary cancer 2,490 0.30 0.12 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,12 Lung Primary cancer 3,252 0.27 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,13 Lung Primary cancer 3,100 0.19 0.08 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,14 Lung Primary cancer 3,477 0.14 0.10 Homogeneous Weakly segregated
NSCLC_38242124__IMC__176_C2,15 Lung Primary cancer 1,355 0.00 0.33 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,2 Lung Primary cancer 4,196 0.37 0.11 Highly modular Weakly segregated
NSCLC_38242124__IMC__176_C2,3 Lung Primary cancer 3,670 0.14 0.10 Homogeneous Weakly segregated
NSCLC_38242124__IMC__176_C2,4 Lung Primary cancer 3,806 0.04 0.16 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__176_C2,5 Lung Primary cancer 3,439 0.35 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,6 Lung Primary cancer 2,739 0.25 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,7 Lung Primary cancer 2,624 0.24 0.12 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,8 Lung Primary cancer 3,111 0.26 0.13 Weakly structured Weakly segregated
NSCLC_38242124__IMC__176_C2,9 Lung Primary cancer 3,920 0.17 0.16 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__176_C3,1 Lung Primary cancer 5,581 0.01 0.15 Homogeneous Weakly segregated
NSCLC_38242124__IMC__176_C3,10 Lung Primary cancer 3,932 0.28 0.11 Weakly structured Weakly segregated