scAtria single-cell spatial atlas resource

NSCLC_38242124 · IMC / Imaging Mass Cytometry

NSCLC_38242124 · NSCLC_38242124__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered

Spatial Domain (Tier 1)

1,751-1,800 of 2,070
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Spatial Domain (Tier 1)

Dominant neighborhood compartment and purity from Tier 1 domain summaries.

2,069 ready
Sample Organ Disease state Cells Dominant compartment ?Largest Tier 1 spatial domain by sample fraction; this is a biological neighborhood label, not a row-count summary. Domain share Purity Diversity
NSCLC_38242124__IMC__88_A2,11 Lung Primary cancer 3,636 Tumor/Malignant 51.3% 0.96 0.12
NSCLC_38242124__IMC__88_A2,12 Lung Primary cancer 1,485 Tumor/Malignant 31.8% 0.90 0.34
NSCLC_38242124__IMC__88_A2,13 Lung Primary cancer 1,977 Stromal 44.6% 0.87 0.34
NSCLC_38242124__IMC__88_A2,14 Lung Primary cancer 2,944 Tumor/Malignant 37.5% 0.99 0.05
NSCLC_38242124__IMC__88_A2,15 Lung Primary cancer 2,890 Other 30.6% 0.34 1.02
NSCLC_38242124__IMC__88_A2,16 Lung Primary cancer 3,143 Tumor/Malignant 86.7% 0.98 0.07
NSCLC_38242124__IMC__88_A2,2 Lung Primary cancer 2,338 Tumor/Malignant 40.4% 0.97 0.11
NSCLC_38242124__IMC__88_A2,3 Lung Primary cancer 1,983 Tumor/Malignant 47.3% 0.95 0.18
NSCLC_38242124__IMC__88_A2,4 Lung Primary cancer 3,229 Tumor/Malignant 29.2% 0.87 0.33
NSCLC_38242124__IMC__88_A2,5 Lung Primary cancer 1,642 Stromal 50.3% 0.96 0.11
NSCLC_38242124__IMC__88_A2,6 Lung Primary cancer 3,461 Tumor/Malignant 41.1% 0.96 0.19
NSCLC_38242124__IMC__88_A2,7 Lung Primary cancer 1,860 Tumor/Malignant 86.8% 0.99 0.02
NSCLC_38242124__IMC__88_A2,8 Lung Primary cancer 1,169 Stromal 49.4% 0.94 0.15
NSCLC_38242124__IMC__88_A2,9 Lung Primary cancer 3,898 Tumor/Malignant 42.3% 0.99 0.06
NSCLC_38242124__IMC__88_A3,1 Lung Primary cancer 2,563 Tumor/Malignant 45.6% 0.87 0.36
NSCLC_38242124__IMC__88_A3,10 Lung Primary cancer 3,551 Stromal 34.1% 0.76 0.59
NSCLC_38242124__IMC__88_A3,11 Lung Primary cancer 1,855 Stromal 31.3% 0.89 0.34
NSCLC_38242124__IMC__88_A3,12 Lung Primary cancer 2,749 Tumor/Malignant 30.2% 0.92 0.26
NSCLC_38242124__IMC__88_A3,13 Lung Primary cancer 2,710 Tumor/Malignant 61.1% 0.96 0.12
NSCLC_38242124__IMC__88_A3,14 Lung Primary cancer 2,364 Tumor/Malignant 46.1% 0.96 0.14
NSCLC_38242124__IMC__88_A3,16 Lung Primary cancer 3,270 Tumor/Malignant 58.2% 0.96 0.13
NSCLC_38242124__IMC__88_A3,2 Lung Primary cancer 2,814 Tumor/Malignant 73.3% 0.98 0.07
NSCLC_38242124__IMC__88_A3,3 Lung Primary cancer 3,654 Tumor/Malignant 38.1% 0.53 0.75
NSCLC_38242124__IMC__88_A3,4 Lung Primary cancer 3,733 Tumor/Malignant 82.3% 0.99 0.04
NSCLC_38242124__IMC__88_A3,6 Lung Primary cancer 1,653 Tumor/Malignant 38.5% 0.93 0.19
NSCLC_38242124__IMC__88_A3,7 Lung Primary cancer 3,220 Immune 32.8% 0.90 0.30
NSCLC_38242124__IMC__88_A3,8 Lung Primary cancer 2,029 Tumor/Malignant 58.7% 0.97 0.07
NSCLC_38242124__IMC__88_A3,9 Lung Primary cancer 2,418 Tumor/Malignant 26.0% 0.96 0.17
NSCLC_38242124__IMC__88_A4,1 Lung Primary cancer 2,500 Tumor/Malignant 37.3% 0.58 0.84
NSCLC_38242124__IMC__88_A4,10 Lung Primary cancer 3,599 Tumor/Malignant 56.4% 0.97 0.08
NSCLC_38242124__IMC__88_A4,11 Lung Primary cancer 2,207 Stromal 27.2% 0.90 0.29
NSCLC_38242124__IMC__88_A4,12 Lung Primary cancer 3,092 Tumor/Malignant 61.2% 0.97 0.13
NSCLC_38242124__IMC__88_A4,13 Lung Primary cancer 2,399 Tumor/Malignant 69.7% 0.93 0.16
NSCLC_38242124__IMC__88_A4,14 Lung Primary cancer 1,431 Stromal 48.6% 0.92 0.25
NSCLC_38242124__IMC__88_A4,15 Lung Primary cancer 3,532 Tumor/Malignant 46.5% 0.94 0.17
NSCLC_38242124__IMC__88_A4,16 Lung Primary cancer 2,852 Tumor/Malignant 88.0% 0.99 0.04
NSCLC_38242124__IMC__88_A4,2 Lung Primary cancer 6,729 Tumor/Malignant 38.8% 0.92 0.22
NSCLC_38242124__IMC__88_A4,3 Lung Primary cancer 3,108 Stromal 28.3% 0.35 1.01
NSCLC_38242124__IMC__88_A4,4 Lung Primary cancer 3,072 Tumor/Malignant 94.0% 0.99 0.03
NSCLC_38242124__IMC__88_A4,7 Lung Primary cancer 2,900 Immune 53.3% 0.99 0.06
NSCLC_38242124__IMC__88_A4,8 Lung Primary cancer 2,901 Tumor/Malignant 52.0% 0.97 0.11
NSCLC_38242124__IMC__88_A4,9 Lung Primary cancer 3,469 Tumor/Malignant 30.7% 0.92 0.28
NSCLC_38242124__IMC__88_A5,1 Lung Primary cancer 2,324 Tumor/Malignant 85.2% 1.00 0.02
NSCLC_38242124__IMC__88_A5,10 Lung Primary cancer 2,995 Tumor/Malignant 59.6% 0.98 0.08
NSCLC_38242124__IMC__88_A5,11 Lung Primary cancer 4,081 Tumor/Malignant 78.1% 0.98 0.09
NSCLC_38242124__IMC__88_A5,12 Lung Primary cancer 2,371 Tumor/Malignant 49.8% 0.99 0.04
NSCLC_38242124__IMC__88_A5,13 Lung Primary cancer 2,420 Stromal 34.0% 0.89 0.30
NSCLC_38242124__IMC__88_A5,14 Lung Primary cancer 3,717 Immune 39.0% 0.93 0.21
NSCLC_38242124__IMC__88_A5,15 Lung Primary cancer 3,147 Tumor/Malignant 40.8% 0.75 0.58
NSCLC_38242124__IMC__88_A5,16 Lung Primary cancer 4,423 Tumor/Malignant 59.0% 0.99 0.03