scAtria single-cell spatial atlas resource

NSCLC_38242124 · IMC / Imaging Mass Cytometry

NSCLC_38242124 · NSCLC_38242124__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered

Spatial Domains

Dominant neighborhood compartment and purity from Tier 1 domain summaries. Bulk files are centralized on the Download page.

1,951-2,000 of 2,070
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Spatial Domains

Dominant neighborhood compartment and purity from Tier 1 domain summaries.

2,069 ready
Sample Organ Disease state Cells Dominant compartment ?Largest Tier 1 spatial domain by sample fraction; this is a biological neighborhood label, not a row-count summary. Domain share Purity Diversity
NSCLC_38242124__IMC__88_B7,8 Lung Primary cancer 201 Tumor/Malignant 59.7% 0.67 0.55
NSCLC_38242124__IMC__88_B7,9 Lung Primary cancer 367 Tumor/Malignant 54.0% 0.96 0.17
NSCLC_38242124__IMC__88_B8,1 Lung Primary cancer 2,911 Stromal 35.9% 0.85 0.40
NSCLC_38242124__IMC__88_B8,10 Lung Primary cancer 3,536 Tumor/Malignant 59.0% 0.99 0.03
NSCLC_38242124__IMC__88_B8,12 Lung Primary cancer 3,920 Tumor/Malignant 54.4% 0.96 0.11
NSCLC_38242124__IMC__88_B8,13 Lung Primary cancer 4,127 Tumor/Malignant 58.4% 0.93 0.21
NSCLC_38242124__IMC__88_B8,14 Lung Primary cancer 543 Tumor/Malignant 42.7% 0.86 0.40
NSCLC_38242124__IMC__88_B8,16 Lung Primary cancer 3,380 Tumor/Malignant 48.2% 1.00 0.05
NSCLC_38242124__IMC__88_B8,2 Lung Primary cancer 3,799 Tumor/Malignant 40.2% 0.98 0.15
NSCLC_38242124__IMC__88_B8,3 Lung Primary cancer 3,990 Tumor/Malignant 35.7% 0.93 0.24
NSCLC_38242124__IMC__88_B8,4 Lung Primary cancer 3,835 Tumor/Malignant 63.0% 0.96 0.15
NSCLC_38242124__IMC__88_B8,5 Lung Primary cancer 4,608 Stromal 29.2% 0.90 0.30
NSCLC_38242124__IMC__88_B8,6 Lung Primary cancer 3,347 Tumor/Malignant 51.4% 0.96 0.13
NSCLC_38242124__IMC__88_B8,7 Lung Primary cancer 2,969 Tumor/Malignant 43.3% 0.95 0.22
NSCLC_38242124__IMC__88_B8,8 Lung Primary cancer 2,955 Stromal 40.6% 0.47 0.75
NSCLC_38242124__IMC__88_B8,9 Lung Primary cancer 3,102 Tumor/Malignant 52.2% 0.91 0.25
NSCLC_38242124__IMC__88_C1,1 Lung Primary cancer 2,352 Stromal 30.7% 0.73 0.66
NSCLC_38242124__IMC__88_C1,10 Lung Primary cancer 2,998 Tumor/Malignant 47.4% 0.95 0.20
NSCLC_38242124__IMC__88_C1,11 Lung Primary cancer 2,439 Tumor/Malignant 47.2% 0.93 0.25
NSCLC_38242124__IMC__88_C1,12 Lung Primary cancer 3,362 Tumor/Malignant 37.6% 0.97 0.10
NSCLC_38242124__IMC__88_C1,13 Lung Primary cancer 2,658 Tumor/Malignant 27.6% 0.88 0.33
NSCLC_38242124__IMC__88_C1,14 Lung Primary cancer 2,535 Tumor/Malignant 38.0% 0.87 0.36
NSCLC_38242124__IMC__88_C1,15 Lung Primary cancer 2,630 Tumor/Malignant 53.7% 0.92 0.24
NSCLC_38242124__IMC__88_C1,2 Lung Primary cancer 1,438 Stromal 36.0% 0.80 0.49
NSCLC_38242124__IMC__88_C1,3 Lung Primary cancer 4,167 Tumor/Malignant 33.2% 0.94 0.19
NSCLC_38242124__IMC__88_C1,5 Lung Primary cancer 2,891 Tumor/Malignant 48.9% 0.95 0.19
NSCLC_38242124__IMC__88_C1,6 Lung Primary cancer 2,689 Tumor/Malignant 41.7% 0.53 0.84
NSCLC_38242124__IMC__88_C1,7 Lung Primary cancer 125 Stromal 52.0% 0.40 0.78
NSCLC_38242124__IMC__88_C1,8 Lung Primary cancer 4,431 Immune 48.0% 0.88 0.35
NSCLC_38242124__IMC__88_C1,9 Lung Primary cancer 1,768 Immune 32.1% 0.93 0.23
NSCLC_38242124__IMC__88_C2,1 Lung Primary cancer 2,758 Tumor/Malignant 57.2% 0.96 0.10
NSCLC_38242124__IMC__88_C2,10 Lung Primary cancer 3,307 Tumor/Malignant 35.1% 0.94 0.22
NSCLC_38242124__IMC__88_C2,11 Lung Primary cancer 1,306 Stromal 31.2% 0.81 0.53
NSCLC_38242124__IMC__88_C2,12 Lung Primary cancer 3,372 Tumor/Malignant 36.8% 0.96 0.14
NSCLC_38242124__IMC__88_C2,13 Lung Primary cancer 1,907 Tumor/Malignant 49.6% 0.95 0.17
NSCLC_38242124__IMC__88_C2,14 Lung Primary cancer 2,427 Stromal 30.0% 0.80 0.46
NSCLC_38242124__IMC__88_C2,15 Lung Primary cancer 1,403 Tumor/Malignant 29.8% 0.97 0.14
NSCLC_38242124__IMC__88_C2,2 Lung Primary cancer 5,346 Immune 63.3% 0.98 0.07
NSCLC_38242124__IMC__88_C2,3 Lung Primary cancer 3,214 Tumor/Malignant 26.1% 0.92 0.24
NSCLC_38242124__IMC__88_C2,6 Lung Primary cancer 2,389 Tumor/Malignant 34.8% 0.51 0.88
NSCLC_38242124__IMC__88_C2,8 Lung Primary cancer 3,538 Stromal 39.4% 0.90 0.33
NSCLC_38242124__IMC__88_C2,9 Lung Primary cancer 2,497 Tumor/Malignant 32.0% 0.95 0.23
NSCLC_38242124__IMC__88_C3,1 Lung Primary cancer 2,992 Tumor/Malignant 28.2% 0.51 0.75
NSCLC_38242124__IMC__88_C3,11 Lung Primary cancer 2,885 Tumor/Malignant 54.9% 0.93 0.22
NSCLC_38242124__IMC__88_C3,12 Lung Primary cancer 5,783 Immune 81.8% 0.97 0.09
NSCLC_38242124__IMC__88_C3,14 Lung Primary cancer 4,881 Immune 93.0% 0.99 0.02
NSCLC_38242124__IMC__88_C3,15 Lung Primary cancer 682 Tumor/Malignant 28.2% 0.48 0.91
NSCLC_38242124__IMC__88_C3,2 Lung Primary cancer 1,570 Stromal 25.4% 0.34 1.02
NSCLC_38242124__IMC__88_C3,3 Lung Primary cancer 383 Tumor/Malignant 42.8% 0.89 0.20
NSCLC_38242124__IMC__88_C3,4 Lung Primary cancer 133 Stromal 56.4% 0.64 0.65