NSCLC_38242124 · IMC / Imaging Mass Cytometry

NSCLC_38242124 · NSCLC_38242124__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered

Network Topology

Network Topology (Tier 1)

2,069 ready
Sample Organ Disease state Cells Q modularity ?Delaunay graph modularity: Q < 0.15 homogeneous; 0.15-0.35 weakly structured; Q >= 0.35 highly modular. r assortativity ?Delaunay graph assortativity: r <= -0.15 highly dispersed; -0.15 to -0.02 weakly mixed; -0.02 to 0.02 neutral; 0.02 to 0.15 weakly segregated; r >= 0.15 highly compartmentalized. Modularity rank Assortativity rank
NSCLC_38242124__IMC__178_C3,5 Lung Primary cancer 3,214 0.15 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C3,6 Lung Primary cancer 1,618 0.18 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C3,7 Lung Primary cancer 3,626 0.12 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,1 Lung Primary cancer 3,180 0.11 0.14 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,11 Lung Primary cancer 1,793 0.20 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,12 Lung Primary cancer 2,303 0.17 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,14 Lung Primary cancer 2,709 0.21 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,15 Lung Primary cancer 69 0.25 0.33 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,17 Lung Primary cancer 3,857 0.12 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,18 Lung Primary cancer 3,117 0.01 0.06 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,2 Lung Primary cancer 3,234 0.25 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,3 Lung Primary cancer 841 0.04 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,4 Lung Primary cancer 3,588 0.39 0.20 Highly modular Highly compartmentalized
NSCLC_38242124__IMC__178_C4,5 Lung Primary cancer 1,781 0.32 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,6 Lung Primary cancer 2,389 0.31 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,7 Lung Primary cancer 1,156 0.13 0.20 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,8 Lung Primary cancer 2,624 0.19 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,9 Lung Primary cancer 3,608 0.33 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C5,1 Lung Primary cancer 2,844 0.33 0.20 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C5,10 Lung Primary cancer 3,113 0.39 0.20 Highly modular Highly compartmentalized

Network Topology (Tier 2)

2,069 ready
Sample Organ Disease state Cells Q modularity ?Delaunay graph modularity: Q < 0.15 homogeneous; 0.15-0.35 weakly structured; Q >= 0.35 highly modular. r assortativity ?Delaunay graph assortativity: r <= -0.15 highly dispersed; -0.15 to -0.02 weakly mixed; -0.02 to 0.02 neutral; 0.02 to 0.15 weakly segregated; r >= 0.15 highly compartmentalized. Modularity rank Assortativity rank
NSCLC_38242124__IMC__178_C3,5 Lung Primary cancer 3,214 0.16 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C3,6 Lung Primary cancer 1,618 0.19 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C3,7 Lung Primary cancer 3,626 0.13 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,1 Lung Primary cancer 3,180 0.12 0.15 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,11 Lung Primary cancer 1,793 0.21 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,12 Lung Primary cancer 2,303 0.17 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,14 Lung Primary cancer 2,709 0.21 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,15 Lung Primary cancer 69 0.25 0.33 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,17 Lung Primary cancer 3,857 0.13 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,18 Lung Primary cancer 3,117 0.01 0.06 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,2 Lung Primary cancer 3,234 0.25 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,3 Lung Primary cancer 841 0.04 0.12 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,4 Lung Primary cancer 3,588 0.40 0.17 Highly modular Highly compartmentalized
NSCLC_38242124__IMC__178_C4,5 Lung Primary cancer 1,781 0.32 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,6 Lung Primary cancer 2,389 0.34 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,7 Lung Primary cancer 1,156 0.14 0.17 Homogeneous Highly compartmentalized
NSCLC_38242124__IMC__178_C4,8 Lung Primary cancer 2,624 0.19 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,9 Lung Primary cancer 3,608 0.33 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C5,1 Lung Primary cancer 2,844 0.33 0.17 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C5,10 Lung Primary cancer 3,113 0.39 0.17 Highly modular Highly compartmentalized

Network Topology (Tier 3)

2,069 ready
Sample Organ Disease state Cells Q modularity ?Delaunay graph modularity: Q < 0.15 homogeneous; 0.15-0.35 weakly structured; Q >= 0.35 highly modular. r assortativity ?Delaunay graph assortativity: r <= -0.15 highly dispersed; -0.15 to -0.02 weakly mixed; -0.02 to 0.02 neutral; 0.02 to 0.15 weakly segregated; r >= 0.15 highly compartmentalized. Modularity rank Assortativity rank
NSCLC_38242124__IMC__178_C3,5 Lung Primary cancer 3,214 0.16 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C3,6 Lung Primary cancer 1,618 0.19 0.14 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C3,7 Lung Primary cancer 3,626 0.13 0.10 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,1 Lung Primary cancer 3,180 0.12 0.13 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,11 Lung Primary cancer 1,793 0.21 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,12 Lung Primary cancer 2,303 0.17 0.10 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,14 Lung Primary cancer 2,709 0.21 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,15 Lung Primary cancer 69 0.25 0.26 Weakly structured Highly compartmentalized
NSCLC_38242124__IMC__178_C4,17 Lung Primary cancer 3,857 0.18 0.10 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,18 Lung Primary cancer 3,117 0.01 0.06 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,2 Lung Primary cancer 3,234 0.25 0.10 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,3 Lung Primary cancer 841 0.14 0.10 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,4 Lung Primary cancer 3,588 0.43 0.12 Highly modular Weakly segregated
NSCLC_38242124__IMC__178_C4,5 Lung Primary cancer 1,781 0.32 0.13 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,6 Lung Primary cancer 2,389 0.39 0.12 Highly modular Weakly segregated
NSCLC_38242124__IMC__178_C4,7 Lung Primary cancer 1,156 0.14 0.11 Homogeneous Weakly segregated
NSCLC_38242124__IMC__178_C4,8 Lung Primary cancer 2,624 0.19 0.13 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C4,9 Lung Primary cancer 3,608 0.33 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C5,1 Lung Primary cancer 2,844 0.34 0.11 Weakly structured Weakly segregated
NSCLC_38242124__IMC__178_C5,10 Lung Primary cancer 3,113 0.39 0.08 Highly modular Weakly segregated