scAtria single-cell spatial atlas resource

PDAC_40269162 · CosMx SMI / NanoString SMI

PDAC_40269162 · PDAC_40269162__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered PMID 40269162 DOI 10.1038/s41586-025-08927-x
Samples

Sample manifest

1-50 of 84
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Distant_PDAC_Slide1_38 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 920 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Distant_PDAC_Slide1_39 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,086 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Distant_PDAC_Slide1_40 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 997 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Juxtalesional_PDAC_Slide1_33 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 800 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Juxtalesional_PDAC_Slide1_34 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 768 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Juxtalesional_PDAC_Slide1_35 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 750 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Juxtalesional_PDAC_Slide1_36 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 918 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Juxtalesional_PDAC_Slide1_37 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 647 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Juxtalesional_PDAC_Slide1_44 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 734 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Tumor_bed_PDAC_Slide1_29 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 758 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Tumor_bed_PDAC_Slide1_30 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 423 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Tumor_bed_PDAC_Slide1_31 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 256 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-1_Tumor_bed_PDAC_Slide1_45 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 565 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Distant_PDAC_Slide1_26 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 308 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Distant_PDAC_Slide1_27 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 576 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Juxtalesional_PDAC_Slide1_20 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,145 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Juxtalesional_PDAC_Slide1_21 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 757 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Juxtalesional_PDAC_Slide1_22 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,120 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Juxtalesional_PDAC_Slide1_23 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 986 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Juxtalesional_PDAC_Slide1_24 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,195 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Juxtalesional_PDAC_Slide1_42 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 955 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Tumor_bed_PDAC_Slide1_15 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,266 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Tumor_bed_PDAC_Slide1_16 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,341 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Tumor_bed_PDAC_Slide1_17 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 873 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Tumor_bed_PDAC_Slide1_18 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,289 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Tumor_bed_PDAC_Slide1_19 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,626 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_LiM-2_Tumor_bed_PDAC_Slide1_43 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,258 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Juxtalesional_PDAC_Slide1_10 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 699 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Juxtalesional_PDAC_Slide1_11 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 958 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Juxtalesional_PDAC_Slide1_6 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 666 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Juxtalesional_PDAC_Slide1_7 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 701 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Juxtalesional_PDAC_Slide1_8 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 520 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Juxtalesional_PDAC_Slide1_9 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 433 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Tumor_bed_PDAC_Slide1_1 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,026 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Tumor_bed_PDAC_Slide1_2 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,084 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Tumor_bed_PDAC_Slide1_3 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 872 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Tumor_bed_PDAC_Slide1_4 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 905 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Tumor_bed_PDAC_Slide1_41 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 585 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_1_Pt-8_Pri_Tumor_bed_PDAC_Slide1_5 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 451 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Juxtalesional_PDAC_Slide2_26 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 319 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Juxtalesional_PDAC_Slide2_27 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,017 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Juxtalesional_PDAC_Slide2_28 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,375 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Juxtalesional_PDAC_Slide2_29 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 855 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Juxtalesional_PDAC_Slide2_30 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 718 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Juxtalesional_PDAC_Slide2_43 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,036 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Tumor_bed_PDAC_Slide2_21 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 876 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Tumor_bed_PDAC_Slide2_22 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 613 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Tumor_bed_PDAC_Slide2_23 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 2,050 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Tumor_bed_PDAC_Slide2_24 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 1,508 Curated Domains, Interaction, Topology
PDAC_40269162__CosMx_SMI__Slide_2_Pt-13_Pri_Tumor_bed_PDAC_Slide2_25 Pancreas Primary cancer Pancreatic ductal adenocarcinoma 886 Curated Domains, Interaction, Topology