Features
Cell-ontology markers
Features tested
16
Label tier
cell_type_tier_3
Marker output
18 rows
QC
Limited panel
Seurat FindAllMarkers, one curated cell-ontology label versus all others. Effect size is logFC; significance is BH FDR.
| Cell ontology | Feature | logFC | FDR | p value |
|---|---|---|---|---|
| Fibroblast | sma | 77.685 | 0.00e+0 | 0.00e+0 |
| T cell | cd3e | 42.888 | 0.00e+0 | 0.00e+0 |
| T cell | cd8 | 1.128 | 0.00e+0 | 0.00e+0 |
| Macrophage | cd68 | 41.196 | 0.00e+0 | 0.00e+0 |
| Macrophage | mpo | 1.723 | 2.95e-97 | 1.97e-97 |
| Macrophage | cd11c | 3.628 | 4.74e-19 | 4.74e-19 |
| ILC lineage cell | cd4 | 13.133 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | cd56 | 6.937 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | foxp3 | 6.276 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | cd34 | 6.104 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | cd8 | 5.703 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | cd163 | 4.635 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | mpo | 2.858 | 0.00e+0 | 0.00e+0 |
| ILC lineage cell | cd11c | 0.330 | 0.00e+0 | 0.00e+0 |
| B cell | cd20 | 12.686 | 0.00e+0 | 0.00e+0 |
| Epithelial cell, unspecified | ido1 | 1.815 | 0.00e+0 | 0.00e+0 |
| Endothelial cell | cd163 | 1.714 | 0.00e+0 | 0.00e+0 |
| Endothelial cell | mpo | 2.273 | 4.67e-34 | 4.67e-34 |