scAtria single-cell spatial atlas resource

SpinalCord_38513664 · ISS / In Situ Sequencing

SpinalCord_38513664 · SpinalCord_38513664__ISS

ISS / In Situ Sequencing Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-50 of 52
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

44 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
SpinalCord_38513664__ISS__CNTRL_LATE_C_R1 Spinal cord 6,120 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_LATE_C_R2 Spinal cord 6,800 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_LATE_C_R3 Spinal cord 5,851 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R1 Spinal cord 4,584 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R2 Spinal cord 4,782 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R3 Spinal cord 4,509 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R1 Spinal cord 29,500 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R2 Spinal cord 36,918 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R3 Spinal cord 33,728 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R4 Spinal cord 52,884 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R1 Spinal cord 5,586 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R2 Spinal cord 4,562 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R3 Spinal cord 4,865 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R4 Spinal cord 4,669 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R1 Spinal cord 5,499 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R2 Spinal cord 4,701 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R3 Spinal cord 4,978 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R4 Spinal cord 5,335 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R1 Spinal cord 3,776 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R2 Spinal cord 2,461 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R3 Spinal cord 2,469 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R4 Spinal cord 3,217 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R1 Spinal cord 6,281 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R2 Spinal cord 6,554 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R3 Spinal cord 4,898 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R4 Spinal cord 4,912 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R1 Spinal cord 6,100 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R2 Spinal cord 6,875 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R3 Spinal cord 5,919 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R4 Spinal cord 5,731 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_LATE_C_R1 Spinal cord 9,804 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_LATE_C_R2 Spinal cord 7,766 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_LATE_C_R3 Spinal cord 8,832 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_LATE_L_R1 Spinal cord 6,525 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_LATE_L_R2 Spinal cord 6,270 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_LATE_L_R3 Spinal cord 5,758 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_B_R1 Spinal cord 34,541 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R2 Spinal cord 39,215 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R3 Spinal cord 39,814 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R4 Spinal cord 54,943 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_C_R1 Spinal cord 7,429 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R2 Spinal cord 8,366 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R3 Spinal cord 5,483 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R4 Spinal cord 10,013 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R1 Spinal cord 11,651 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R2 Spinal cord 9,269 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R3 Spinal cord 11,418 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R4 Spinal cord 9,265 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_T_R1 Spinal cord 6,626 Ready T1T2T3 View
Manifest Domain summary
SpinalCord_38513664__ISS__EAE_PEAK_T_R2 Spinal cord 5,288 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

44 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
SpinalCord_38513664__ISS__CNTRL_LATE_C_R1 Spinal cord 6,120 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_LATE_C_R2 Spinal cord 6,800 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_LATE_C_R3 Spinal cord 5,851 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R1 Spinal cord 4,584 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R2 Spinal cord 4,782 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R3 Spinal cord 4,509 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R1 Spinal cord 29,500 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R2 Spinal cord 36,918 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R3 Spinal cord 33,728 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R4 Spinal cord 52,884 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R1 Spinal cord 5,586 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R2 Spinal cord 4,562 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R3 Spinal cord 4,865 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R4 Spinal cord 4,669 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R1 Spinal cord 5,499 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R2 Spinal cord 4,701 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R3 Spinal cord 4,978 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R4 Spinal cord 5,335 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R1 Spinal cord 3,776 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R2 Spinal cord 2,461 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R3 Spinal cord 2,469 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R4 Spinal cord 3,217 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R1 Spinal cord 6,281 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R2 Spinal cord 6,554 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R3 Spinal cord 4,898 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R4 Spinal cord 4,912 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R1 Spinal cord 6,100 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R2 Spinal cord 6,875 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R3 Spinal cord 5,919 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R4 Spinal cord 5,731 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_LATE_C_R1 Spinal cord 9,804 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_LATE_C_R2 Spinal cord 7,766 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_LATE_C_R3 Spinal cord 8,832 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_LATE_L_R1 Spinal cord 6,525 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_LATE_L_R2 Spinal cord 6,270 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_LATE_L_R3 Spinal cord 5,758 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_B_R1 Spinal cord 34,541 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R2 Spinal cord 39,215 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R3 Spinal cord 39,814 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R4 Spinal cord 54,943 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_C_R1 Spinal cord 7,429 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R2 Spinal cord 8,366 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R3 Spinal cord 5,483 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R4 Spinal cord 10,013 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R1 Spinal cord 11,651 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R2 Spinal cord 9,269 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R3 Spinal cord 11,418 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R4 Spinal cord 9,265 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_T_R1 Spinal cord 6,626 Ready T1T2T3 View
Manifest Pair summary
SpinalCord_38513664__ISS__EAE_PEAK_T_R2 Spinal cord 5,288 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

44 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
SpinalCord_38513664__ISS__CNTRL_LATE_C_R1 Spinal cord 6,120 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_LATE_C_R2 Spinal cord 6,800 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_LATE_C_R3 Spinal cord 5,851 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R1 Spinal cord 4,584 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R2 Spinal cord 4,782 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_LATE_L_R3 Spinal cord 4,509 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R1 Spinal cord 29,500 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R2 Spinal cord 36,918 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R3 Spinal cord 33,728 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R4 Spinal cord 52,884 NA T1T2T3 View NA
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R1 Spinal cord 5,586 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R2 Spinal cord 4,562 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R3 Spinal cord 4,865 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_C_R4 Spinal cord 4,669 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R1 Spinal cord 5,499 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R2 Spinal cord 4,701 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R3 Spinal cord 4,978 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_L_R4 Spinal cord 5,335 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R1 Spinal cord 3,776 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R2 Spinal cord 2,461 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R3 Spinal cord 2,469 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__CNTRL_PEAK_T_R4 Spinal cord 3,217 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R1 Spinal cord 6,281 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R2 Spinal cord 6,554 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R3 Spinal cord 4,898 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_NS_L_R4 Spinal cord 4,912 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R1 Spinal cord 6,100 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R2 Spinal cord 6,875 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R3 Spinal cord 5,919 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_EARLY_SO_L_R4 Spinal cord 5,731 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_LATE_C_R1 Spinal cord 9,804 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_LATE_C_R2 Spinal cord 7,766 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_LATE_C_R3 Spinal cord 8,832 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_LATE_L_R1 Spinal cord 6,525 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_LATE_L_R2 Spinal cord 6,270 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_LATE_L_R3 Spinal cord 5,758 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_B_R1 Spinal cord 34,541 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R2 Spinal cord 39,215 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R3 Spinal cord 39,814 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_B_R4 Spinal cord 54,943 NA T1T2T3 View NA
SpinalCord_38513664__ISS__EAE_PEAK_C_R1 Spinal cord 7,429 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R2 Spinal cord 8,366 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R3 Spinal cord 5,483 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_C_R4 Spinal cord 10,013 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R1 Spinal cord 11,651 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R2 Spinal cord 9,269 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R3 Spinal cord 11,418 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_L_R4 Spinal cord 9,265 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_T_R1 Spinal cord 6,626 Ready T1T2T3 View
Manifest Topology summary
SpinalCord_38513664__ISS__EAE_PEAK_T_R2 Spinal cord 5,288 Ready T1T2T3 View
Manifest Topology summary