scAtria single-cell spatial atlas resource

TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion

TNBC_38194915 · TNBC_38194915__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-27 of 27
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

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Sample Organ Cells Graph Tiers Open Downloads
TNBC_38194915__PCF_CODEX__210113_Breast_Cassette11_reg1_v5 Breast 173,460 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210115_Breast_Cassette15_reg1_v5 Breast 141,044 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210118_Breast_Cassette14_reg1_v5 Breast 113,909 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210118_Breast_Cassette14_reg2_v5 Breast 74,059 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210122_Breast_Cassette7_reg1_v5 Breast 60,223 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210125_Breast_Cassette5_reg1_v5 Breast 16,702 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210125_Breast_Cassette5_reg2_v5 Breast 254,687 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg1_v5 Breast 34,159 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg2_v5 Breast 85,931 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg1_v5 Breast 169,656 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg2_v5 Breast 56,452 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210201_Breast_Cassette1_reg1_v5 Breast 200,217 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210203_Breast_Cassette8_reg1_v5 Breast 91,354 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210203_Breast_Cassette8_reg2_v5 Breast 113,756 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210205_Breast_Cassette2_reg1_v5 Breast 164,096 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg1_v5 Breast 62,214 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg2_v5 Breast 171,606 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg1_v5 Breast 34,025 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg2_v5 Breast 28,998 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg1_v5 Breast 49,826 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg2_v5 Breast 24,928 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210212_Breast_Cassette17_reg1_v5 Breast 54,582 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210212_Breast_Cassette17_reg2_v5 Breast 47,065 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg1_v5 Breast 56,084 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg2_v5 Breast 156,001 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg1_v5 Breast 100,851 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg2_v5 Breast 61,853 NA T1T2T3 View NA
Interaction Propensity

Cell-type contact samples

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Sample Organ Cells Graph Tiers Open Downloads
TNBC_38194915__PCF_CODEX__210113_Breast_Cassette11_reg1_v5 Breast 173,460 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210115_Breast_Cassette15_reg1_v5 Breast 141,044 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210118_Breast_Cassette14_reg1_v5 Breast 113,909 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210118_Breast_Cassette14_reg2_v5 Breast 74,059 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210122_Breast_Cassette7_reg1_v5 Breast 60,223 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210125_Breast_Cassette5_reg1_v5 Breast 16,702 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210125_Breast_Cassette5_reg2_v5 Breast 254,687 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg1_v5 Breast 34,159 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg2_v5 Breast 85,931 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg1_v5 Breast 169,656 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg2_v5 Breast 56,452 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210201_Breast_Cassette1_reg1_v5 Breast 200,217 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210203_Breast_Cassette8_reg1_v5 Breast 91,354 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210203_Breast_Cassette8_reg2_v5 Breast 113,756 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210205_Breast_Cassette2_reg1_v5 Breast 164,096 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg1_v5 Breast 62,214 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg2_v5 Breast 171,606 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg1_v5 Breast 34,025 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg2_v5 Breast 28,998 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg1_v5 Breast 49,826 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg2_v5 Breast 24,928 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210212_Breast_Cassette17_reg1_v5 Breast 54,582 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210212_Breast_Cassette17_reg2_v5 Breast 47,065 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg1_v5 Breast 56,084 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg2_v5 Breast 156,001 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg1_v5 Breast 100,851 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg2_v5 Breast 61,853 NA T1T2T3 View NA
Network Topology

Graph-topology samples

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Sample Organ Cells Graph Tiers Open Downloads
TNBC_38194915__PCF_CODEX__210113_Breast_Cassette11_reg1_v5 Breast 173,460 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210115_Breast_Cassette15_reg1_v5 Breast 141,044 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210118_Breast_Cassette14_reg1_v5 Breast 113,909 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210118_Breast_Cassette14_reg2_v5 Breast 74,059 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210122_Breast_Cassette7_reg1_v5 Breast 60,223 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210125_Breast_Cassette5_reg1_v5 Breast 16,702 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210125_Breast_Cassette5_reg2_v5 Breast 254,687 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg1_v5 Breast 34,159 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg2_v5 Breast 85,931 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg1_v5 Breast 169,656 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg2_v5 Breast 56,452 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210201_Breast_Cassette1_reg1_v5 Breast 200,217 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210203_Breast_Cassette8_reg1_v5 Breast 91,354 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210203_Breast_Cassette8_reg2_v5 Breast 113,756 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210205_Breast_Cassette2_reg1_v5 Breast 164,096 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg1_v5 Breast 62,214 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg2_v5 Breast 171,606 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg1_v5 Breast 34,025 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg2_v5 Breast 28,998 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg1_v5 Breast 49,826 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg2_v5 Breast 24,928 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210212_Breast_Cassette17_reg1_v5 Breast 54,582 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210212_Breast_Cassette17_reg2_v5 Breast 47,065 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg1_v5 Breast 56,084 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg2_v5 Breast 156,001 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg1_v5 Breast 100,851 NA T1T2T3 View NA
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg2_v5 Breast 61,853 NA T1T2T3 View NA