scAtria single-cell spatial atlas resource

10x Genomics Visium HD p2 TMA showcase

10x Genomics Visium HD p2 TMA showcase · VisiumHD_p2_TMA__Visium_HD

Visium HD Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-36 of 36
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

33 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C01 Breast 4,058 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C02 Breast 2,544 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C03 Breast 1,365 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C04 Breast 3,118 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C05 Breast 2,525 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C06 Breast 3,077 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C01 Breast 4,203 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C02 Breast 3,125 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C03 Breast 3,655 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C04 Breast 3,869 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C05 Breast 2,582 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C06 Breast 1,702 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C01 Breast 3,399 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C02 Breast 2,022 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C03 Breast 3,414 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C04 Breast 4,074 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C05 Breast 6,029 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C06 Breast 2,785 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C01 Breast 3,704 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C02 Breast 387 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C03 Breast 3,573 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C04 Breast 2,965 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C05 Breast 6,549 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C06 Breast 3,364 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C01 Breast 4,218 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C02 Breast 2,824 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C03 Breast 2,683 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C04 Breast 5,904 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C05 Breast 5,349 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C06 Breast 2,884 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C01 Breast 4,181 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C02 Breast 3,357 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C03 Breast 2,299 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C04 Breast 1,720 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C05 Breast 2,324 Ready T1T2T3 View
Manifest Domain summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C06 Breast 1,663 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

33 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C01 Breast 4,058 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C02 Breast 2,544 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C03 Breast 1,365 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C04 Breast 3,118 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C05 Breast 2,525 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C06 Breast 3,077 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C01 Breast 4,203 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C02 Breast 3,125 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C03 Breast 3,655 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C04 Breast 3,869 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C05 Breast 2,582 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C06 Breast 1,702 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C01 Breast 3,399 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C02 Breast 2,022 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C03 Breast 3,414 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C04 Breast 4,074 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C05 Breast 6,029 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C06 Breast 2,785 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C01 Breast 3,704 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C02 Breast 387 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C03 Breast 3,573 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C04 Breast 2,965 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C05 Breast 6,549 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C06 Breast 3,364 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C01 Breast 4,218 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C02 Breast 2,824 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C03 Breast 2,683 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C04 Breast 5,904 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C05 Breast 5,349 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C06 Breast 2,884 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C01 Breast 4,181 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C02 Breast 3,357 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C03 Breast 2,299 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C04 Breast 1,720 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C05 Breast 2,324 Ready T1T2T3 View
Manifest Pair summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C06 Breast 1,663 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

33 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C01 Breast 4,058 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C02 Breast 2,544 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C03 Breast 1,365 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C04 Breast 3,118 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C05 Breast 2,525 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C06 Breast 3,077 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C01 Breast 4,203 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C02 Breast 3,125 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C03 Breast 3,655 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C04 Breast 3,869 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C05 Breast 2,582 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C06 Breast 1,702 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C01 Breast 3,399 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C02 Breast 2,022 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C03 Breast 3,414 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C04 Breast 4,074 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C05 Breast 6,029 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C06 Breast 2,785 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C01 Breast 3,704 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C02 Breast 387 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C03 Breast 3,573 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C04 Breast 2,965 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C05 Breast 6,549 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C06 Breast 3,364 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C01 Breast 4,218 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C02 Breast 2,824 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C03 Breast 2,683 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C04 Breast 5,904 NA T1T2T3 View NA
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C05 Breast 5,349 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C06 Breast 2,884 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C01 Breast 4,181 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C02 Breast 3,357 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C03 Breast 2,299 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C04 Breast 1,720 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C05 Breast 2,324 Ready T1T2T3 View
Manifest Topology summary
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C06 Breast 1,663 Ready T1T2T3 View
Manifest Topology summary