scAtria single-cell spatial atlas resource

Xenium Human Multi-Tissue and Cancer Panel showcase

Xenium Human Multi-Tissue and Cancer Panel showcase ยท XeniumMulti_10xGenomics__Xenium

Xenium Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

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Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

0 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Kidney_FFPE_Protein_updated Kidney 465,534 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Ovary_Cancer_FF Ovary 205,082 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBoneMarrow_acute_lymphoid_leukemia_section Bone marrow 225,906 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBoneMarrow_nondiseased_section Bone marrow 84,518 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBone_nondiseased_section Musculoskeletal 33,801 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hHeart_nondiseased_section_FFPE Heart 26,366 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_cancer_section Kidney 56,510 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_nondiseased_section Kidney 97,560 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLiver_cancer_section_FFPE Liver 162,628 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLiver_nondiseased_section_FFPE Liver 239,271 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLung_cancer_section Lung 150,365 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLymphNode_nondiseased_section Lymphoid tissue 377,985 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hPancreas_Cancer_Add_on_FFPE Pancreas 190,965 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hPancreas_nondiseased_section Pancreas 103,901 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_1_FFPE Skin 68,476 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_2_FFPE Skin 90,106 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_follicular_lymphoid_hyperplasia_section_FFPE Lymphoid tissue 864,388 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_reactive_follicular_hyperplasia_section_FFPE Lymphoid tissue 1,349,620 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_humanLung_Cancer_FFPE Lung 162,254 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_human_Pancreas_FFPE Pancreas 140,702 NA T1T2T3 View NA
Interaction Propensity

Cell-type contact samples

0 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Kidney_FFPE_Protein_updated Kidney 465,534 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Ovary_Cancer_FF Ovary 205,082 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBoneMarrow_acute_lymphoid_leukemia_section Bone marrow 225,906 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBoneMarrow_nondiseased_section Bone marrow 84,518 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBone_nondiseased_section Musculoskeletal 33,801 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hHeart_nondiseased_section_FFPE Heart 26,366 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_cancer_section Kidney 56,510 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_nondiseased_section Kidney 97,560 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLiver_cancer_section_FFPE Liver 162,628 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLiver_nondiseased_section_FFPE Liver 239,271 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLung_cancer_section Lung 150,365 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLymphNode_nondiseased_section Lymphoid tissue 377,985 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hPancreas_Cancer_Add_on_FFPE Pancreas 190,965 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hPancreas_nondiseased_section Pancreas 103,901 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_1_FFPE Skin 68,476 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_2_FFPE Skin 90,106 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_follicular_lymphoid_hyperplasia_section_FFPE Lymphoid tissue 864,388 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_reactive_follicular_hyperplasia_section_FFPE Lymphoid tissue 1,349,620 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_humanLung_Cancer_FFPE Lung 162,254 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_human_Pancreas_FFPE Pancreas 140,702 NA T1T2T3 View NA
Network Topology

Graph-topology samples

0 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Kidney_FFPE_Protein_updated Kidney 465,534 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Ovary_Cancer_FF Ovary 205,082 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBoneMarrow_acute_lymphoid_leukemia_section Bone marrow 225,906 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBoneMarrow_nondiseased_section Bone marrow 84,518 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBone_nondiseased_section Musculoskeletal 33,801 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hHeart_nondiseased_section_FFPE Heart 26,366 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_cancer_section Kidney 56,510 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_nondiseased_section Kidney 97,560 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLiver_cancer_section_FFPE Liver 162,628 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLiver_nondiseased_section_FFPE Liver 239,271 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLung_cancer_section Lung 150,365 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hLymphNode_nondiseased_section Lymphoid tissue 377,985 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hPancreas_Cancer_Add_on_FFPE Pancreas 190,965 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hPancreas_nondiseased_section Pancreas 103,901 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_1_FFPE Skin 68,476 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_2_FFPE Skin 90,106 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_follicular_lymphoid_hyperplasia_section_FFPE Lymphoid tissue 864,388 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_reactive_follicular_hyperplasia_section_FFPE Lymphoid tissue 1,349,620 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_humanLung_Cancer_FFPE Lung 162,254 NA T1T2T3 View NA
XeniumMulti_10xGenomics__Xenium__Xenium_V1_human_Pancreas_FFPE Pancreas 140,702 NA T1T2T3 View NA