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scAtria
single-cell spatial atlas resource
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Cross-study comparisons
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Interaction Propensity
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Applied
Dataset
All datasets
Organ
All organs
Disease state
All disease states
Technique
All techniques
Modality
All modalities
Compare
Choose one comparison and optional directed labels.
Tier
?
Each comparison uses one ontology tier at a time. Tier 1 is broad lineage, Tier 2 is broad biology, and Tier 3 is the primary cross-study cell-type level.
Tier 1
Tier 2
Tier 3
Comparison group
?
Choose the metadata grouping used to summarize samples in the comparison plot and table.
Organ
Disease state
Organ × disease state
Metric
?
Metrics are computed within the selected Interaction Propensity module and selected ontology tier, not mixed across tiers.
Mean propensity
From label
All cell ontologies
To label
All cell ontologies
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Matrix
Pair profile
Samples
In situ
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Domains
Topology
Pair across samples
Sample-level profile for one interaction pair
Compare one pair across samples.
Pair
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Metric
Signed log2 propensity
Raw propensity score
Conditional propensity
Observed contacts
Interaction FDR
Samples
0
Significant
0
Top sample
NA
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Download selected pair across samples CSV
