Skip to main content
Loading...
Opening page
Page is slow. Click to refresh.
scAtria
single-cell spatial atlas resource
Home
Browse
Cross-study comparisons
Domains
Interaction
Topology
Download
Help
Search
Interaction Propensity
Help
Ready samples
Loading...
Filter scope
Updated live; 7,164 samples in the current scope.
Applied
Dataset
All datasets
Organ
All organs
Disease state
All disease states
Technique
All techniques
Modality
All modalities
Compare
Choose one comparison and optional directed labels.
Tier
?
Each comparison uses one ontology tier at a time. Tier 1 is broad lineage, Tier 2 is broad biology, and Tier 3 is the primary cross-study cell-type level.
Tier 1
Tier 2
Tier 3
Comparison group
?
Choose the metadata grouping used to summarize samples in the comparison plot and table.
Organ
Disease state
Organ × disease state
Metric
?
Metrics are computed within the selected Interaction Propensity module and selected ontology tier, not mixed across tiers.
Mean propensity
From label
All cell ontologies
To label
All cell ontologies
Compare
Matrix
Pair profile
Samples
In situ
Downloads
Help
Domains
Topology
Interaction Propensity
Directed contact matrix
X: from label. Y: to label. Red enriched; blue depleted.
Loading matrix scope...
Download current matrix scope CSV
Download full interaction pair CSV
Download directional contrast CSV
