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scAtria
single-cell spatial atlas resource
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Network Topology
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Updated live; 7,167 samples in the current scope.
Applied
Dataset
All datasets
Organ
All organs
Disease state
All disease states
Technique
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Modality
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Tier
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Each comparison uses one ontology tier at a time. Tier 1 is broad lineage, Tier 2 is broad biology, and Tier 3 is the primary cross-study cell-type level.
Tier 1
Tier 2
Tier 3
Comparison group
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Choose the metadata grouping used to summarize samples in the comparison plot and table.
Organ
Disease state
Organ × disease state
Metric
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Metrics are computed within the selected Network Topology module and selected ontology tier, not mixed across tiers.
Modularity
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Nodes
Node profile
Edges
Buckets
Samples
In situ
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Domains
Interaction
Lineage edges
Sample-level profile for one lineage edge
Collapsed lineage-to-lineage graph edges.
Lineage edge
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Samples
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Total edges
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Top sample
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