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scAtria
single-cell spatial atlas resource
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Applied
Dataset
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Organ
All organs
Disease state
All disease states
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Modality
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Choose one comparison. Metric labels include a short interpretation cue.
Tier
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Each comparison uses one ontology tier at a time. Tier 1 is broad lineage, Tier 2 is broad biology, and Tier 3 is the primary cross-study cell-type level.
Tier 1
Tier 2
Tier 3
Comparison group
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Choose the metadata grouping used to summarize samples in the comparison plot and table.
Organ
Disease state
Organ × disease state
Metric
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Modularity measures community separation within the spatial graph. Assortativity measures whether similar cell labels connect preferentially. Metrics are computed within one selected ontology tier.
Modularity — community separation
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Nodes
Node profile
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Node centrality
Top lineage nodes in the current scope
Most connected lineage labels in the current scope.
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