HNSCC_41616773 PCF discovery cohort

HNSCC_41616773 PCF discovery cohort ยท HNSCCDiscovery_41616773__PCF_CODEX

PCF / CODEX / PhenoCycler Fusion Spatial proteomics Curated Tiered PMID 41616773 DOI 10.1016/j.ccell.2026.01.003
Samples

Sample manifest

251-300 of 390
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg056 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 5,304 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg057 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 6,278 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg058 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 9,534 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg059 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,783 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg060 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,701 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg062 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,775 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg063 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,011 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg064 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,835 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg065 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,001 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg066 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 2,381 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg067 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,723 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg070 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,991 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg071 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,684 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg072 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,474 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg073 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,847 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg074 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,824 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg075 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 5,494 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg076 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 7,628 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg077 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,273 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg078 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,794 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__522_S2reg080 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,339 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg001 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,720 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg003 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,433 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg004 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,238 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg005 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,107 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg006 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,696 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg007 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,588 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg008 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 8,629 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg009 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,994 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg010 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,750 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg013 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 1,881 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg014 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,052 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg015 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 8,016 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg016 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 6,936 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg017 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,348 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg018 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,991 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg021 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,638 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg022 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,246 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg023 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,959 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg024 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 3,236 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg025 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,473 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg026 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,155 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg029 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,799 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg030 Head and neck Primary cancer Head and neck squamous cell carcinoma 3,141 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg031 Head and neck Primary cancer Head and neck squamous cell carcinoma 2,741 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg032 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,039 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg033 Lymph node metastasis Metastatic cancer Lymphoid tissue metastasis from Head and neck 3,817 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg034 Lymphoid tissue Healthy/control Organ-specific lymph-node control/no cancer 2,568 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg035 Head and neck Primary cancer Head and neck squamous cell carcinoma 951 Curated Domains, Interaction, Topology
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg036 Head and neck Primary cancer Head and neck squamous cell carcinoma 1,593 Curated Domains, Interaction, Topology